PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G10650.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 829aa MW: 93647 Da PI: 6.891

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G10650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.8e-50	459	587	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtd el v+yLk+k+ gk+l++ ++++e+d+yk+ PwdLp k +++++++ewyfF++rd+ky++g+r+nr+t++gyWkatgkd++v ONIVA04G10650.1 459 LPPGFRFHPTDVELTVYYLKRKLLGKHLRC-NAVSELDLYKFAPWDLPeKsSLQSKDREWYFFCPRDRKYSSGSRTNRSTEAGYWKATGKDRPV 551 79**************************.89**********95357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++++vg+k+tLvf+ g+ p+g +tdWvm eyrle ONIVA04G10650.1 552 IY-NSQTVGMKRTLVFHLGKPPRGDRTDWVMYEYRLE 587 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 829 aa Download sequence
MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY 60 AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY 120 VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR 180 SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR 240 AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL 300 RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM 360 IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH 420 EWRTPHHHPP SPLRGGAAFP SLADRHHQLL RPSMAKTSLP PGFRFHPTDV ELTVYYLKRK 480 LLGKHLRCNA VSELDLYKFA PWDLPEKSSL QSKDREWYFF CPRDRKYSSG SRTNRSTEAG 540 YWKATGKDRP VIYNSQTVGM KRTLVFHLGK PPRGDRTDWV MYEYRLEDKE LSASGVKLDA 600 CVLCKIFQKS GPGPKIGEQY GAPFNEDDWN EANGELSSFA FSVPPCALES SNGRLNTAGQ 660 QLAVSDNIGS SLDHCSETND KIAVGGCGTT SPSVPFDTIH TQQLAEIISC FSTDLLNSVS 720 RDGSLPDSTA DYDNDNEVSS DDGEAIFNEL DELDSQSDES ISNHCNSCGE DLIPPTLEVL 780 KTEQYLELND LSFSLADDPD PCNLLLTTNL SDQNHPELET SSNRKALRL

Sequence ? help Back to Top

Protein Sequence Length: 829 aa Download sequence

MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY  60
AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY  120
VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR  180
SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR  240
AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL  300
RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM  360
IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH  420
EWRTPHHHPP SPLRGGAAFP SLADRHHQLL RPSMAKTSLP PGFRFHPTDV ELTVYYLKRK  480
LLGKHLRCNA VSELDLYKFA PWDLPEKSSL QSKDREWYFF CPRDRKYSSG SRTNRSTEAG  540
YWKATGKDRP VIYNSQTVGM KRTLVFHLGK PPRGDRTDWV MYEYRLEDKE LSASGVKLDA  600
CVLCKIFQKS GPGPKIGEQY GAPFNEDDWN EANGELSSFA FSVPPCALES SNGRLNTAGQ  660
QLAVSDNIGS SLDHCSETND KIAVGGCGTT SPSVPFDTIH TQQLAEIISC FSTDLLNSVS  720
RDGSLPDSTA DYDNDNEVSS DDGEAIFNEL DELDSQSDES ISNHCNSCGE DLIPPTLEVL  780
KTEQYLELND LSFSLADDPD PCNLLLTTNL SDQNHPELET SSNRKALRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	9e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G10650.1