PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G10110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 564aa MW: 62040.7 Da PI: 5.1096 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 82.3 | 4.1e-26 | 93 | 158 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll+++++gi++ln++ak L dv ++RRiYDi+NVLe+ +liekk kn+irw+g ONIVA04G10110.1 93 RYDNSLGLLTRKFINLLKQAQDGILDLNDAAKIL---DV--RKRRIYDITNVLEGTGLIEKKLKNRIRWRG 158 689*******************************...**..9***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 564 aa Download sequence |
MSSGGGRPPA AQHIVRSVRQ RFVPLPPPLA RAPFAAAPGD YHRFAAASRG GEIDEGIVIR 60 RTPLKRKTPC GESEAAESSE RSPGNPSTPA SSRYDNSLGL LTRKFINLLK QAQDGILDLN 120 DAAKILDVRK RRIYDITNVL EGTGLIEKKL KNRIRWRGSD DSGTNLDSDI SCLKTEVENL 180 YIQEQALDRS ISEIREKMEE LTEDESNHRW LFVTEDDING LPCFQNEALI AIKGPRGTTV 240 EVPDPDEAGD YLQRRYRILL RSTMGPIDIY LVSQYKKMEE LGETATPPRH ASVVEPPSIA 300 TEAGHSSKQT MPLNVQQDIQ ETPELNASRA FGRMKKITPS DVDTDADYWL LTDDDISITH 360 MWTTASEMQW DQIDTNDFLA EEISDTPCAL NQPSAAASEP TGSVKEMSES VIEVARYAPP 420 YLARSSFACS VLDFLRPNSR PYFSVISSAV WASPSLVSCT AESRHRGGRE EARSRGCLRC 480 CSNRCWCLAV GAAGLARRRA PAAMEGPRAR MVYEGSERAR GRRRGGGEVN GDAEAGGESG 540 DREIEPPGLL VVVVFTGDIL VMDG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 151 | RKRRIYDITNVLEGTGLIEKKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36010.1 | 2e-96 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G10110.1 |