PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G08960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 269aa MW: 27877.1 Da PI: 10.2157 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66 | 7.2e-21 | 67 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g ONIVA04G08960.1 67 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAIAYDEAALRFKG 116 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MVTALAHVIR AAPDLHLPHH PSSSASAAAH PQQASSFYPT AAAAASSPSD QLAAAAAAAE 60 EQGRRRHYRG VRQRPWGKWA AEIRDPKKAA RVWLGTFDTA EDAAIAYDEA ALRFKGTKAK 120 LNFPERVQGR TDLGFLVTRG IPPAATHGGG YYPSSSPAAG ACPPPRQQQT VVPYPDLMRY 180 AQLLQGGVGG SYMPFGGAAT MSSSTVSSSS APQILDFSTQ QLIRAGPPSP MPSSGSGSAT 240 AAASSTTSAS SPGAWPYGGS ERKKKDSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 1e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G08960.1 |