PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G06580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 201aa MW: 21443.1 Da PI: 11.1404 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.6 | 3.7e-10 | 107 | 151 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+ +I+r + Rt+ q+ s+ qky ONIVA04G06580.1 107 PWTEEEHRLFLLGLDKFGKGDLQSISRNFVISRTPTQVASHAQKY 151 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MAEGADDGDG APGRSSPAVC VRGGARRPSE RGEELAGRPC AGRSSHAVLA RGRSCSSPVI 60 GSSGSAVGDC PRLPVYTNAW RKSGGGGRYD GGKCCSKAEQ KRRKGIPWTE EEHRLFLLGL 120 DKFGKGDLQS ISRNFVISRT PTQVASHAQK YFIRLNSMNR DRRRSSIHDI TSVTAGDVAA 180 QQGPITGQAK AALRRRSGHR A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 6e-39 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G06580.1 |