PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA04G03680.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 130aa    MW: 14367.8 Da    PI: 5.957
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA04G03680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.72.3e-211061155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     s+y+GVr+++ +g+++AeIrdp  +    r++lg+f+taeeAa+a+++a+ +++g
  ONIVA04G03680.1 10 SKYRGVRRRP-WGKFAAEIRDPERG--GSRVWLGTFDTAEEAARAYDRAAFAMKG 61
                     89********.**********8333..4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MEDDKKEAAS KYRGVRRRPW GKFAAEIRDP ERGGSRVWLG TFDTAEEAAR AYDRAAFAMK  60
GAMAVLNFPG RTSSTGSSSS SSSSSTPPAP VTTSRHCADT TEKVELVYLD DKVLDELLAE  120
DYSYRNNNNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-23ERF family protein