PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G43980.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 388aa MW: 41767.8 Da PI: 7.2789

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G43980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	8.8e-31	200	258	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY eHnh+ ONIVA03G43980.1 200 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERSRSDPNMLVITYAAEHNHP 258 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MDMMEEEAAN AATAQAAAAG DLADVVARAN ARAFLVSTPH HHPSPLHPLP PPPPMPQAPH 60 QYYPAPQITI PYHHHHHGEL RRPTTIAYTD APVPFETAGP PSTVVDSYHH LTPGDAGYGM 120 PRPLALQISQ HALCGGGDVV MGGGGAGAAD DGEEAIRISP LTPSAHHQMM KRKNEVKKVV 180 CIPAPPATSS RGGGGEVIPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CMARKQVERS 240 RSDPNMLVIT YAAEHNHPWP MQRNVLAGYA RSHHSTHATA SSSRHKQQQQ QQTNQLQPAL 300 ITSSSSSSSS PFNLYADVVL GGQQASMMMT TEGAGAGLGI QPSAADEVFA ELEELEPDNP 360 TMINANMQVY STTSRPGVSS YDHQWHKF

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MDMMEEEAAN AATAQAAAAG DLADVVARAN ARAFLVSTPH HHPSPLHPLP PPPPMPQAPH  60
QYYPAPQITI PYHHHHHGEL RRPTTIAYTD APVPFETAGP PSTVVDSYHH LTPGDAGYGM  120
PRPLALQISQ HALCGGGDVV MGGGGAGAAD DGEEAIRISP LTPSAHHQMM KRKNEVKKVV  180
CIPAPPATSS RGGGGEVIPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CMARKQVERS  240
RSDPNMLVIT YAAEHNHPWP MQRNVLAGYA RSHHSTHATA SSSRHKQQQQ QQTNQLQPAL  300
ITSSSSSSSS PFNLYADVVL GGQQASMMMT TEGAGAGLGI QPSAADEVFA ELEELEPDNP  360
TMINANMQVY STTSRPGVSS YDHQWHKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	1e-54	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G43980.1