PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G43890.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 515aa MW: 55220.1 Da PI: 10.0564

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G43890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.4	3.3e-33	56	110	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl ONIVA03G43890.1 56 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 110 79****************************************************8 PP
2	Myb_DNA-binding	70.1	3.6e-22	58	109	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e+++++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ ONIVA03G43890.1 58 RLRWTVELHDRFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 109 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MFPSSSPSPS PSSSKKQQQL SGGVGVGGAA AAASSNDRPP LCVQGDSGLV LTTDPKPRLR 60 WTVELHDRFV DAVTQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQHKDFNDH 120 SVKDAMDMQR NAASSSGIMG RSMNDVHVNE ALRMKMEVQR RFHEQLEVQK HLQMRVEAQG 180 KYMQTILEKA YQAISSSGDC ATWHAGYKSL GSQAVLDIGS SMSFPSLQDD LQLYGGSHLD 240 HLHQQHEQME IRPSIDTFLA FNYSSSTGKS PMVWPGADDG GGEPAKISGD HQLQTAAPAT 300 TTMMMEAITM SGGDSMGSKG FEGQMSSKLD MRSPPPQQTA LPVGSERMSS PIVGAKARNI 360 SYGRVKSKEE ERSELAFLVR EIRNLMAGNR DIVILKIHPG PTCQSLTLSF TPHLSTSLQN 420 PHSSRFLTLR TAAGRSDEGG GGARDDVGRS GRQQRAPATT GAWDGGERSL GLRGRRSSGQ 480 QRTEFGAAGG GGGGAQSGGW RGLALVAGAL SSSHR

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MFPSSSPSPS PSSSKKQQQL SGGVGVGGAA AAASSNDRPP LCVQGDSGLV LTTDPKPRLR  60
WTVELHDRFV DAVTQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQHKDFNDH  120
SVKDAMDMQR NAASSSGIMG RSMNDVHVNE ALRMKMEVQR RFHEQLEVQK HLQMRVEAQG  180
KYMQTILEKA YQAISSSGDC ATWHAGYKSL GSQAVLDIGS SMSFPSLQDD LQLYGGSHLD  240
HLHQQHEQME IRPSIDTFLA FNYSSSTGKS PMVWPGADDG GGEPAKISGD HQLQTAAPAT  300
TTMMMEAITM SGGDSMGSKG FEGQMSSKLD MRSPPPQQTA LPVGSERMSS PIVGAKARNI  360
SYGRVKSKEE ERSELAFLVR EIRNLMAGNR DIVILKIHPG PTCQSLTLSF TPHLSTSLQN  420
PHSSRFLTLR TAAGRSDEGG GGARDDVGRS GRQQRAPATT GAWDGGERSL GLRGRRSSGQ  480
QRTEFGAAGG GGGGAQSGGW RGLALVAGAL SSSHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	4e-82	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G43890.1