PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | ONIVA03G42290.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 977aa MW: 107811 Da PI: 4.8206 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.5e-08 | 733 | 774 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 r +W++ E ++++++ +q+G++ ++ I + ++ ++++q++ ++ ONIVA03G42290.2 733 RAKWSKSETDKFYEGLQQFGSD-FAMIQHLFP-DKSRNQVRQKF 774 569*******************.*********.********998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 977 aa Download sequence |
MLDPVPVQEE AYEAGYGEVA SRAGEGRGSS SGHIAMIDDE ADFGNITDAT EGQAAAKFRP 60 KARAKPRKTS LPSRSLAPHP TVESTDENVE TLNKDSTSHE QSVDKKAASL GCHGNEADGN 120 ACASGGILDT PSEDVVTVSL GLVNNPDVAL DSSTVFASVH KVSQNEENND DLSHVATHKE 180 SMVVSDTQAP PTCCSAKTID DLADFEGLCD DTHVEEERVA KFQPKFRVKT SKATSKSQRT 240 NQKAGVSTVD VVSQNKEDGK DQAGCNDKQL HSPTGHQESV QISYSQAHLG THNSTIDDVA 300 NSDSIMEEPA QEEMAAKFQP RLRPKAGGAS PGVAETIDAA CVATPEFGVS SADVVSQDTE 360 EDSHREGLSD GSCQKYIDEE AITTSGTGPP QDLDATVDLD SHAEMVNPHP DGSPLIIGEP 420 SAETTVKFQP YVRRKKGKGK SVSFVPPNVS HAHTPTDTNS ETSNSSHFCK DIATGESLSN 480 LPQQASEKIC ISGEHHPDDQ ECNDPENQYH EGEPYDHVIE QEPERDVRET GTPMILRNRG 540 KLQKDGIPEH TADDIMDEDF GEPPSDEQDN DSGDEYTARG KQKGRRKSRE KNINKEPSRG 600 TKRTSGDSTI EESQKQKLQK NKSKTSSRGQ KKTSKDSSVE QPEKKLTHRI RRKRMEEVKT 660 LLETPDHEID RMKLSGKEIP SGPSSSNHST SQFGDMDDEY NEQDNWDNDR TENHVVENTT 720 KLNYHSYMNR QTRAKWSKSE TDKFYEGLQQ FGSDFAMIQH LFPDKSRNQV RQKFKAEEKK 780 HPMQVHDAIM HRSREVIKKL NIEDVQPDIN NTHEQEGTSN EEDPGNKNIP GGLINEEEEN 840 GLDWSDKELD MHRSEVEEKE HVSTNDDDDD DLGDAKMEVV QCEDKVRGGG ARDDIVRLST 900 GRPSQSHHSL DPLALLSMAA SRLLPHTVSG LQLKVRCLFQ GSSAIEHAIK KVQMSILILE 960 HCYQNMNSTY LLLVPYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39160.1 | 4e-30 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | ONIVA03G42290.2 |