PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G42290.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 942aa MW: 104251 Da PI: 4.8669

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G42290.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.3e-08	698	739	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 r +W++ E ++++++ +q+G++ ++ I + ++ ++++q++ ++ ONIVA03G42290.1 698 RAKWSKSETDKFYEGLQQFGSD-FAMIQHLFP-DKSRNQVRQKF 739 569*****************.*****.******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 942 aa Download sequence
MIDDEADFGN ITDATEGQAA AKFRPKARAK PRKTSLPSRS LAPHPTVEST DENVETLNKD 60 STSHEQSVDK KAASLGCHGN EADGNACASG GILDTPSEDV VTVSLGLVNN PDVALDSSTV 120 FASVHKVSQN EENNDDLSHV ATHKESMVVS DTQAPPTCCS AKTIDDLADF EGLCDDTHVE 180 EERVAKFQPK FRVKTSKATS KSQRTNQKAG VSTVDVVSQN KEDGKDQAGC NDKQLHSPTG 240 HQESVQISYS QAHLGTHNST IDDVANSDSI MEEPAQEEMA AKFQPRLRPK AGGASPGVAE 300 TIDAACVATP EFGVSSADVV SQDTEEDSHR EGLSDGSCQK YIDEEAITTS GTGPPQDLDA 360 TVDLDSHAEM VNPHPDGSPL IIGEPSAETT VKFQPYVRRK KGKGKSVSFV PPNVSHAHTP 420 TDTNSETSNS SHFCKDIATG ESLSNLPQQA SEKICISGEH HPDDQECNDP ENQYHEGEPY 480 DHVIEQEPER DVRETGTPMI LRNRGKLQKD GIPEHTADDI MDEDFGEPPS DEQDNDSGDE 540 YTARGKQKGR RKSREKNINK EPSRGTKRTS GDSTIEESQK QKLQKNKSKT SSRGQKKTSK 600 DSSVEQPEKK LTHRIRRKRM EEVKTLLETP DHEIDRMKLS GKEIPSGPSS SNHSTSQFGD 660 MDDEYNEQDN WDNDRTENHV VENTTKLNYH SYMNRQTRAK WSKSETDKFY EGLQQFGSDF 720 AMIQHLFPDK SRNQVRQKFK AEEKKHPMQV HDAIMHRSRE VIKKLNIEDV QPDINNTHEQ 780 EGTSNEEDPG NKNIPGGLIN EEEENGLDWS DKELDMHRSE VEEKEHVSTN DDDDDDLGDA 840 KMEVVQCEDK VRGGGARDDI VRLSTGRPSQ SHHSLDPLAL LSMAASRLLP HTVSGLQLKV 900 RCLFQGSSAI EHAIKKVQMS ILILEHCYQN MNSTYLLLVP YL

Sequence ? help Back to Top

Protein Sequence Length: 942 aa Download sequence

MIDDEADFGN ITDATEGQAA AKFRPKARAK PRKTSLPSRS LAPHPTVEST DENVETLNKD  60
STSHEQSVDK KAASLGCHGN EADGNACASG GILDTPSEDV VTVSLGLVNN PDVALDSSTV  120
FASVHKVSQN EENNDDLSHV ATHKESMVVS DTQAPPTCCS AKTIDDLADF EGLCDDTHVE  180
EERVAKFQPK FRVKTSKATS KSQRTNQKAG VSTVDVVSQN KEDGKDQAGC NDKQLHSPTG  240
HQESVQISYS QAHLGTHNST IDDVANSDSI MEEPAQEEMA AKFQPRLRPK AGGASPGVAE  300
TIDAACVATP EFGVSSADVV SQDTEEDSHR EGLSDGSCQK YIDEEAITTS GTGPPQDLDA  360
TVDLDSHAEM VNPHPDGSPL IIGEPSAETT VKFQPYVRRK KGKGKSVSFV PPNVSHAHTP  420
TDTNSETSNS SHFCKDIATG ESLSNLPQQA SEKICISGEH HPDDQECNDP ENQYHEGEPY  480
DHVIEQEPER DVRETGTPMI LRNRGKLQKD GIPEHTADDI MDEDFGEPPS DEQDNDSGDE  540
YTARGKQKGR RKSREKNINK EPSRGTKRTS GDSTIEESQK QKLQKNKSKT SSRGQKKTSK  600
DSSVEQPEKK LTHRIRRKRM EEVKTLLETP DHEIDRMKLS GKEIPSGPSS SNHSTSQFGD  660
MDDEYNEQDN WDNDRTENHV VENTTKLNYH SYMNRQTRAK WSKSETDKFY EGLQQFGSDF  720
AMIQHLFPDK SRNQVRQKFK AEEKKHPMQV HDAIMHRSRE VIKKLNIEDV QPDINNTHEQ  780
EGTSNEEDPG NKNIPGGLIN EEEENGLDWS DKELDMHRSE VEEKEHVSTN DDDDDDLGDA  840
KMEVVQCEDK VRGGGARDDI VRLSTGRPSQ SHHSLDPLAL LSMAASRLLP HTVSGLQLKV  900
RCLFQGSSAI EHAIKKVQMS ILILEHCYQN MNSTYLLLVP YL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	4e-30	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G42290.1