PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G42070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 187aa MW: 20346.8 Da PI: 8.9603 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.9 | 5.6e-09 | 105 | 149 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 W++eE+ + ++++++ G g+W+ I+ + Rt+ q+ s+ qky ONIVA03G42070.1 105 IWSEEEHRQCLRGIEEIGHGRWTQISIEYVPSRTPIQIASHSQKY 149 6*************************98888************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MGDLVGDGAA PAAAEPAPAA AACRWTRQKD KLLETLVARC AMNRQCVGGW DAIAAAFGDD 60 RTAAQVEQRS SRRRAGGAVK HAAAGPGSDG GGEEGKVVVE KKSGIWSEEE HRQCLRGIEE 120 IGHGRWTQIS IEYVPSRTPI QIASHSQKYF LRMAKPKEDR KRKSIHDTPY HLHLPNAADA 180 HAHQQQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 2e-18 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G42070.1 |