PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G41480.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 319aa    MW: 34185.8 Da    PI: 4.3968
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G41480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.75.7e-2091541128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrd..kkyatgkrknratk.....sg 81 
                      l+pG+ FhP+d+ l++ +L++++++ ++e  + i+++d+y+++P +L         ++++++ wyfF++    +k +t+ r++ra+      ++
  ONIVA03G41480.1   9 LAPGYVFHPSDDGLITLFLRPSIAKIPFED-RLINHADVYSADPAELVGehrpapGTHGSSSVWYFFCSPPftSKRKTSGRRQRAVGgggggES 101
                      579************************998.88**************7335666655557779*****87511444456677776554444477 PP

              NAM  82 yWkatgkdkevlskkgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                      +Wk+ g +k+v+ ++g+ vg  + + +       +g+a++ ++  W+m ey l
  ONIVA03G41480.1 102 VWKSEGGKKAVIGADGRRVGYLQKFSYGvyesssSGSARTFTRLGWCMTEYGL 154
                      8********************99999966677766889999999*******76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MADDDEIALA PGYVFHPSDD GLITLFLRPS IAKIPFEDRL INHADVYSAD PAELVGEHRP  60
APGTHGSSSV WYFFCSPPFT SKRKTSGRRQ RAVGGGGGGE SVWKSEGGKK AVIGADGRRV  120
GYLQKFSYGV YESSSSGSAR TFTRLGWCMT EYGLDDDAID GADKQVLCKV YRSPRAVCAE  180
ARTAAAAKSA DSPCSGSKRK ADDGADHPEA PPSARPRQEE AGSEHGEQPA ILPELDLDAL  240
LSAPMDDSLG VEFDTATTEQ YMRYLMNDEP LPWAPTMEVA GGGDEFIETT NGPCMGEEEI  300
IQRLAAGETL DDILGSNPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-09NAC family protein