PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G40780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 411aa MW: 40799.1 Da PI: 9.248

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G40780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	111	171	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ ONIVA03G40780.1 111 PEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 171 56789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MVFSSVPAVY LDPPNWNQQQ QQAHHGQLPS GGNGGGGGGG GGGVDAHHHH HHQLPPMPPH 60 HGGLMAPRPD MVAAAVAASG GGGGGGGPTG GTAVRPGSMT ERARLAKIPQ PEPGLKCPRC 120 ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV GGGCRRNKRT KSSKSSSSTS 180 AAGSASATGG TSSSTSSTAT GGSSSAAAAA AMMPPQAQLP FLASLHHPLG GGDHYSSGAS 240 RLGFPGLSSL DPVDYQLGGG AAAAAAIGLE QWRLPQIQQL PFLSRNDAMP PPMSGIYPFD 300 AEAAADAAGF AGQLLAGTKV PGSSGLITQL ASVKMEDSNA QSAAMNSSPR EFLGLPGNLQ 360 FWGGGNGAGP GGNGDGATGG SGAGVAPGGG GSGGGWADLS GFNSSSSGNI L

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MVFSSVPAVY LDPPNWNQQQ QQAHHGQLPS GGNGGGGGGG GGGVDAHHHH HHQLPPMPPH  60
HGGLMAPRPD MVAAAVAASG GGGGGGGPTG GTAVRPGSMT ERARLAKIPQ PEPGLKCPRC  120
ESTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV GGGCRRNKRT KSSKSSSSTS  180
AAGSASATGG TSSSTSSTAT GGSSSAAAAA AMMPPQAQLP FLASLHHPLG GGDHYSSGAS  240
RLGFPGLSSL DPVDYQLGGG AAAAAAIGLE QWRLPQIQQL PFLSRNDAMP PPMSGIYPFD  300
AEAAADAAGF AGQLLAGTKV PGSSGLITQL ASVKMEDSNA QSAAMNSSPR EFLGLPGNLQ  360
FWGGGNGAGP GGNGDGATGG SGAGVAPGGG GSGGGWADLS GFNSSSSGNI L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	1e-40	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G40780.1