PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G39930.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 329aa MW: 35256.5 Da PI: 5.4908

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G39930.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31	5.4e-10	200	226	1	27
XXXXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkae 27 e+elkrerrkq+NRe+ArrsR+RK+++ ONIVA03G39930.1 200 ERELKRERRKQSNRESARRSRLRKQER 226 89***********************97 PP
2	bZIP_1	28.8	2.7e-09	246	283	26	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +e+eeL +kv eL+a N++L+ el++lkk ++ +++e+ ONIVA03G39930.1 246 QECEELSQKVTELTAVNSTLRTELDKLKKDCEDMEAEN 283 89********************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MASSAASPSS SKSDDERRQD GDRDTRDPAA SSAAAAAAAQ THAEWAASMQ AYYAAAAAAA 60 GGHPYAWPPP QSVPPMAGCA VPSAAAEGKS KRKTSGGPSG EDSSGSGDGG SEDSSERRDD 120 ADEKGLSPAK WRKLGHPDIE GETSQAAAMS EQNPVKAAPN LNIGMDIWSN STMAAMPSGQ 180 VEVNAGTHLR RDKALSQMDE RELKRERRKQ SNRESARRSR LRKQERPTSF CHPPNYPVTF 240 YGLTNQECEE LSQKVTELTA VNSTLRTELD KLKKDCEDME AENSQLMDEM VQSEGSSVIA 300 TLSIKIDTSK DRHGSSSQLN KHTNDDSKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	223	RRSRLRK
2	217	224	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	5e-26	bZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G39930.1