PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G38840.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 380aa MW: 39911.1 Da PI: 9.9356

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G38840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	305	363	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YYrC+s+ +Cp++k+ver+++dp ++ +tYe+eHnh ONIVA03G38840.1 305 SDNYSWRKYGQKPIKGSPHPRGYYRCSSKkDCPARKHVERCRSDPAMLLVTYENEHNHA 363 69************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MDGVEEANMA AVESSKKLVA ILSKSGDPFR LMAAVAETDE AVSRFGKVVT ILSNRVGHAR 60 ARLGKRRSSP PVDPGCLMDH PLAAAASFPA PSNGRLHFSS SAATASPSPA TAAAASSAAN 120 VTPAVVDRSL FLETTLLDLN SRGAPAPAAS MAAAAKNSSK LAPAPMVNSS SSANHIQFQQ 180 PMKSFQFEQT PISDKFHIEM PRGVGGGGGK EVISFSFDNS VCTSSAATSF FTSISSQLIS 240 MSDAATNSAA AAAAPTTKKP SSCARKATAD DDAGGKCHCP KKKKPREKKV VTVPAISDKV 300 ADIPSDNYSW RKYGQKPIKG SPHPRGYYRC SSKKDCPARK HVERCRSDPA MLLVTYENEH 360 NHAQPLDLSV VQQATANPQT

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MDGVEEANMA AVESSKKLVA ILSKSGDPFR LMAAVAETDE AVSRFGKVVT ILSNRVGHAR  60
ARLGKRRSSP PVDPGCLMDH PLAAAASFPA PSNGRLHFSS SAATASPSPA TAAAASSAAN  120
VTPAVVDRSL FLETTLLDLN SRGAPAPAAS MAAAAKNSSK LAPAPMVNSS SSANHIQFQQ  180
PMKSFQFEQT PISDKFHIEM PRGVGGGGGK EVISFSFDNS VCTSSAATSF FTSISSQLIS  240
MSDAATNSAA AAAAPTTKKP SSCARKATAD DDAGGKCHCP KKKKPREKKV VTVPAISDKV  300
ADIPSDNYSW RKYGQKPIKG SPHPRGYYRC SSKKDCPARK HVERCRSDPA MLLVTYENEH  360
NHAQPLDLSV VQQATANPQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.1	4e-38	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G38840.1