PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G37210.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 347aa MW: 37641.6 Da PI: 8.168

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G37210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.6	3.7e-07	260	289	26	55
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRake 55 ++ e+ LA+ +gL+++q+++WF N+R ++ ONIVA03G37210.1 260 QEMEKMTLAQTTGLDQKQISNWFINQRKRH 289 5668889********************885 PP
2	ELK	41.2	3.4e-14	170	191	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LKhqLlrKY+g+Lg+L+qEFs ONIVA03G37210.1 170 QLKHQLLRKYGGSLGDLRQEFS 191 59*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MESFASLAGG GSSSTTARLP ELIPPENPDR ISPPPLLYQL LAGSASSARH GHGHHHGGGG 60 GAAAAAVQGL QVSPAGAEAA MKAEIMSHPQ YSALLAAYLG CKKVGAPPDV LTKLTAVPAA 120 QQQLDAADGH PRRRHEPRQS NCEGTGSSEE EQDQDTSCPE AEEIDPSDKQ LKHQLLRKYG 180 GSLGDLRQEF SKRTKKGKLP KEARLKLLHW WELHYDKWPY PSVRTHIYAS HLINSTTFFC 240 TKLDLMKMRE LLGCTCVYEQ EMEKMTLAQT TGLDQKQISN WFINQRKRHW KPTPVAGMTF 300 PTVEAAGGGF RHSGHDGGLA AAAAAAALPL YMGSWPFVVD GMYRLGS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MESFASLAGG GSSSTTARLP ELIPPENPDR ISPPPLLYQL LAGSASSARH GHGHHHGGGG  60
GAAAAAVQGL QVSPAGAEAA MKAEIMSHPQ YSALLAAYLG CKKVGAPPDV LTKLTAVPAA  120
QQQLDAADGH PRRRHEPRQS NCEGTGSSEE EQDQDTSCPE AEEIDPSDKQ LKHQLLRKYG  180
GSLGDLRQEF SKRTKKGKLP KEARLKLLHW WELHYDKWPY PSVRTHIYAS HLINSTTFFC  240
TKLDLMKMRE LLGCTCVYEQ EMEKMTLAQT TGLDQKQISN WFINQRKRHW KPTPVAGMTF  300
PTVEAAGGGF RHSGHDGGLA AAAAAAALPL YMGSWPFVVD GMYRLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	4e-38	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G37210.1