PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G37180.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 353aa MW: 38613.1 Da PI: 6.1146

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G37180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.7e-09	265	299	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps+ e+ LA+ +gL+++q+ +WF N+R ++ ONIVA03G37180.1 265 KWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRH 299 669*****************************885 PP
2	ELK	41.2	3.4e-14	219	240	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LKhqLlrKY+g+Lg+L+qEFs ONIVA03G37180.1 219 QLKHQLLRKYGGSLGDLRQEFS 240 59*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MESFASLAGG GSSSTTARLP ELISPENPDH ISPPPLLYQL LAGPESSARQ HGHDGHHHGG 60 GGGEAAAAAV QGQVSPAGAE AAVKAEIMSH PQYSALLAAY LGCKKVGAPP DLLTKLTAVP 120 AAQQLDEADG HPRRRHEPQR DDDPDQLDQF MDAYCSMLTR YREELERPIQ EAAEFFSRVE 180 TQLDSLAESN CEGTGSSEEE QDQDTSCPEA EEIDPSDKQL KHQLLRKYGG SLGDLRQEFS 240 KRTKKGKLPK EARQKLLHWW ELHYKWPYPS EMEKMTLAQT TGLDQKQINN WFINQRKRHW 300 KPTPVAGTAF PTMEAAGGGF RHSGHGGGLA AAAALPLYMG RPFVVDGMYR LGS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MESFASLAGG GSSSTTARLP ELISPENPDH ISPPPLLYQL LAGPESSARQ HGHDGHHHGG  60
GGGEAAAAAV QGQVSPAGAE AAVKAEIMSH PQYSALLAAY LGCKKVGAPP DLLTKLTAVP  120
AAQQLDEADG HPRRRHEPQR DDDPDQLDQF MDAYCSMLTR YREELERPIQ EAAEFFSRVE  180
TQLDSLAESN CEGTGSSEEE QDQDTSCPEA EEIDPSDKQL KHQLLRKYGG SLGDLRQEFS  240
KRTKKGKLPK EARQKLLHWW ELHYKWPYPS EMEKMTLAQT TGLDQKQINN WFINQRKRHW  300
KPTPVAGTAF PTMEAAGGGF RHSGHGGGLA AAAALPLYMG RPFVVDGMYR LGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	8e-73	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G37180.1