PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G36300.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 273aa MW: 28732.2 Da PI: 7.6117

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G36300.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.9e-33	94	151	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+ ONIVA03G36300.2 94 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 151 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MMVPAALDLP VDVVGAAARE EEEEEEEAPA RSGDGGAAAA SSSSSGEPAA PDKRPAAAEA 60 APAAAATATA KKGQKRARQP RFAFMTKSEI DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT 120 NSKCTVKKRV ERSSDDPSVV ITTYEGQHCH HTASFQRGVG GAAVAAHIHG AAAVALAEQM 180 SAFVSPPPQP HMLYGLPRLH PPSSETAVSC SMPTTTSLQE LNNGEGLQRP GYNNSPQAAV 240 TIAQRPPSPS VPPAVSFDKG LLDDIVPPGV RLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	2e-49	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G36300.2