PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G35840.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 570aa MW: 63782.9 Da PI: 7.5522

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G35840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.6	1.2e-12	111	151	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +a+++g ++t qc++++ ONIVA03G35840.1 111 WNADEEILLLEGIEMYGLGNWAEVAEHVG-TKTKAQCIDHYT 151 ***************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MGRSRGVPNS GDDDTNHRSK RRRVASSGDA PDSLSAACGG AGEGGGKKAL YHCNYCNKDI 60 SGKIRIKCSK CPDFDLCVEC FSVGAEVTPH RSNHPYRVMD NLSFPLICPD WNADEEILLL 120 EGIEMYGLGN WAEVAEHVGT KTKAQCIDHY TTAYMNSPCY PLPDMSHVNG KNRKELLAMA 180 KVQGESKKGT SVLPGDLTPK DESPFSPPRV KVEDALGEGL AGRSPSHIAG GANKKASNVG 240 QFKDGANVAK VEDGHVDRSI GVKKPRYSAD EGPSLTELSG YNSKRHEFDP EYDNDAEQAL 300 AEMEFKETDS ETDRELKLRV LRIYLSRLDE RKRRKEFILE RNLLFPNPLE KDLTNEDKEV 360 YHRYKVFMRF LSKEEHEALV RSVLEERKIR RRIQELQECR SAGCRTLAEA KIHIEQKRKK 420 EHEVNAQKAK ESGQLLSNTK VVHKTNRPMK IESDGNLDQK KGGASLDSTG RDSPKTTGHA 480 GTKHWDDWDI VGFPGAELLS TSEKNLCCQN RLLPNHYLKM QEVLMQEIFK GSVAKKEDAH 540 VLFKVDPAKV DNVYDMVTKK LGTNEEAPTV

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MGRSRGVPNS GDDDTNHRSK RRRVASSGDA PDSLSAACGG AGEGGGKKAL YHCNYCNKDI  60
SGKIRIKCSK CPDFDLCVEC FSVGAEVTPH RSNHPYRVMD NLSFPLICPD WNADEEILLL  120
EGIEMYGLGN WAEVAEHVGT KTKAQCIDHY TTAYMNSPCY PLPDMSHVNG KNRKELLAMA  180
KVQGESKKGT SVLPGDLTPK DESPFSPPRV KVEDALGEGL AGRSPSHIAG GANKKASNVG  240
QFKDGANVAK VEDGHVDRSI GVKKPRYSAD EGPSLTELSG YNSKRHEFDP EYDNDAEQAL  300
AEMEFKETDS ETDRELKLRV LRIYLSRLDE RKRRKEFILE RNLLFPNPLE KDLTNEDKEV  360
YHRYKVFMRF LSKEEHEALV RSVLEERKIR RRIQELQECR SAGCRTLAEA KIHIEQKRKK  420
EHEVNAQKAK ESGQLLSNTK VVHKTNRPMK IESDGNLDQK KGGASLDSTG RDSPKTTGHA  480
GTKHWDDWDI VGFPGAELLS TSEKNLCCQN RLLPNHYLKM QEVLMQEIFK GSVAKKEDAH  540
VLFKVDPAKV DNVYDMVTKK LGTNEEAPTV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	24	KRRRV
2	331	336	RKRRKE

Link Out ? help Back to Top
Ensembl	ONIVA03G35840.1