PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G35150.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 397aa MW: 43423.7 Da PI: 5.1018

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G35150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.3	2.8e-34	50	140	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl k+ye++ed+ ++++isw gnsfvv+d + fa +Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +gkkell+ ONIVA03G35150.1 50 FLCKTYEVVEDPGTDTVISWGFAGNSFVVWDANAFAAVLLPRYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGKKELLK 134 9**************************************************************999.........************* PP XXXXXX CS HSF_DNA-bind 96 kikrkk 101 +ikr++ ONIVA03G35150.1 135 TIKRRR 140 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MNPLRVIVKE EELDFAAAAA GEGSPSSWAV GVMDLPRPME GLGEAGPPPF LCKTYEVVED 60 PGTDTVISWG FAGNSFVVWD ANAFAAVLLP RYFKHSNFSS FVRQLNTYGF RKVDPDRWEF 120 ANEGFLRGKK ELLKTIKRRR PPPSSPPSSS SSSSSSQHQQ QPAAACLEVG QFGRDGVVNR 180 LQRDKSVLIA EVVKLRQEQQ TTRAQMQAME ERISAAEQKQ QQMTVFLARA MKNPGFLQML 240 VDRQAGQHGA RNRVLEDALS KKRRRPIEYL LTRNGETCAA GESAAMLAAD GVAEPDGDTT 300 PRGDGGGGGD TESFWMQLLS LGLEEKQRED GVAGGVQESN SGGADVDNDE EDDDDDVDVL 360 VQSIYHLSPN IKKVVPSSSN LGVLRGRSIR LHLYLVS

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MNPLRVIVKE EELDFAAAAA GEGSPSSWAV GVMDLPRPME GLGEAGPPPF LCKTYEVVED  60
PGTDTVISWG FAGNSFVVWD ANAFAAVLLP RYFKHSNFSS FVRQLNTYGF RKVDPDRWEF  120
ANEGFLRGKK ELLKTIKRRR PPPSSPPSSS SSSSSSQHQQ QPAAACLEVG QFGRDGVVNR  180
LQRDKSVLIA EVVKLRQEQQ TTRAQMQAME ERISAAEQKQ QQMTVFLARA MKNPGFLQML  240
VDRQAGQHGA RNRVLEDALS KKRRRPIEYL LTRNGETCAA GESAAMLAAD GVAEPDGDTT  300
PRGDGGGGGD TESFWMQLLS LGLEEKQRED GVAGGVQESN SGGADVDNDE EDDDDDVDVL  360
VQSIYHLSPN IKKVVPSSSN LGVLRGRSIR LHLYLVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	139	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-91	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G35150.1