PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G34220.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 344aa MW: 37793.5 Da PI: 5.2289

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G34220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	4.1e-09	252	286	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yps+ e+ LA+++gL+++q+ +WF N+R ++ ONIVA03G34220.1 252 RWPYPSEMEKIALAESTGLEQKQINNWFINQRKRH 286 669*****************************885 PP
2	ELK	33.2	1.1e-11	207	227	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK++LlrKYsgyLg+L++E+s ONIVA03G34220.1 207 LKRHLLRKYSGYLGGLRKELS 227 9******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MEELEGHRGE GRLPPPPPLL PFPKVSVQVY TVPSSSTAAS AAAAGGARQA VAPATRDGGG 60 RAAGVLDDPV KARIVGCPAE AAEEIAAAAR VREARQRAAA AASRMPPAPE DPELDQFMED 120 YCKLLVECKE ELSRPLQEAE EFLRTVESEL NSINSGPPLT ALISESKAGL DSSDDDEHED 180 GSGMEMMEAA EDEDLGIIDP RSDDKALKRH LLRKYSGYLG GLRKELSKKR KKGKLPKEAR 240 QKLLTWWELH YRWPYPSEME KIALAESTGL EQKQINNWFI NQRKRHWKPT EEMQFAVMEA 300 YHHQSTDAAA AFYVDVDARL VGATAAAPAS AVYTARPDHG VWRA

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MEELEGHRGE GRLPPPPPLL PFPKVSVQVY TVPSSSTAAS AAAAGGARQA VAPATRDGGG  60
RAAGVLDDPV KARIVGCPAE AAEEIAAAAR VREARQRAAA AASRMPPAPE DPELDQFMED  120
YCKLLVECKE ELSRPLQEAE EFLRTVESEL NSINSGPPLT ALISESKAGL DSSDDDEHED  180
GSGMEMMEAA EDEDLGIIDP RSDDKALKRH LLRKYSGYLG GLRKELSKKR KKGKLPKEAR  240
QKLLTWWELH YRWPYPSEME KIALAESTGL EQKQINNWFI NQRKRHWKPT EEMQFAVMEA  300
YHHQSTDAAA AFYVDVDARL VGATAAAPAS AVYTARPDHG VWRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	231	LRKELSKKRK
2	228	232	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	5e-61	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G34220.1