PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G32010.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 476aa    MW: 49264.6 Da    PI: 4.7284
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G32010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0014247267121
                      EEETTTTEEESSHHHHHHHHH CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                      ++C++Cg++F ++  L  H  
  ONIVA03G32010.1 247 FVCSICGRCFGSHQALGGHVL 267
                      89********99998877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MAVNSGDRAR ARGHHGDDDE EGVAVVGEDY PYCSDSDSDD DDDVDRYVFL ARQPAPPVDR  60
DDAEADAGAE GTGCCKRKRR VVDDDDDDDG FSPRQPALLD GSGGQAAAEE EDDEGSSDDD  120
DAMAPRGEAG GGGRGRGVGK VSRKKARLVD LIRSPLLPAE LDGSDKAAPP PPRGVCPKKI  180
AVVVQAKNRK RRRFVDGGEE QEPQPQPPVR GKRSRGPDLE ASEGLQTASA AAAAAAAEAA  240
ERASKRFVCS ICGRCFGSHQ ALGGHVLGHK KKAKNAAIAA AARDATTTAV TEAVAPASQR  300
QSFFAADING QDERGCDGAE GSRYDDDEEK SPVVVDDVAA CHDADVDESR GHGKAESAPA  360
IDAGGDAGNN KVAHGDGEEN DKIAGVVVAS SHDGDSDVGK MKIVQHKCDE CGKVCLTGQA  420
LGGHMSKHRR TRPAANGGEG PATATVADGG AQTVRLIGDD VCLQRAVAIA GFHSAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189193RKRRR