PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G31510.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 834aa    MW: 93445.8 Da    PI: 9.1916
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G31510.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS389.34.4e-1194598301374
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      l++lL++cA+av+++d + a++lL++++++a p+gd  qRla +f+ +L+arla+++s+ly++l +++t+    s+ l+a++l+  ++P+ ++s
  ONIVA03G31510.3 459 LRTLLIHCAQAVAADDRRTANELLKQIRQHAKPNGDGSQRLAYCFADGLEARLAGTGSQLYHKLVAKRTT---ASDMLKAYHLYLAACPFKRLS 549
                      6789************************************************************999999...9******************** PP

             GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                      h++ Nq+Il  ++++++vHiiDf+i  G+QWp+L++ L +R++gpp+lRiTg++ p++g   +e++eetg+rLa++Ae++gvpfe++  +a+++
  ONIVA03G31510.3 550 HFLSNQTILSLTKNASKVHIIDFGIYFGFQWPCLIRRLFKREGGPPKLRITGIDVPQPGfrPTERIEETGQRLAEYAEKIGVPFEYQG-IASKW 642
                      **********************************************************9*****************************.7**** PP

             GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      e++++e+L++k++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+le+++pr++ 
  ONIVA03G31510.3 643 ETIRVEDLNIKKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSIPFFITRFREALFHFSALFDMLETTVPRDDA 736
                      ********************************************************************************************** PP

             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++S W+
  ONIVA03G31510.3 737 QRALIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVLKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAISTWK 830
                      *****************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    
MPSSPYSLSL SSFSLLPSLF PVFLLHRSVP LLLLLLSSIR THRHLRSAAA AAAAAARPRS  60
HAHLARRRRE GPGNRWAAEG EKVLEGATPR ASPSRLGPNR RLSMGLDNNF GELSGMFCGL  120
SYDGYTDHGS QSDYFRFADP QPAIVPQMDA RPSSAASSTA SRAAVSSGTD NPEDWEFISD  180
ESLNYISRML MEEDIDEKVS MYQEESAALR AAAKPFYDIL GHKFPPSPDR QLVAWPLDSP  240
SESSTSSYPH SLASSVTSSN ISGAVDSSQR RYVGHSEYRS LSGHSSQPPV GPSSDVRNAM  300
ETLEDPLISN GRIPEYLFES FPTWDFRRGV DEAQKFLPGS DKVVIDLEAG GVAKRQEAGK  360
AISLNGSKAE VLKVKKNRQS EDLDVMEGRN SKQSAFCSDE PDWIEMFDVL LRQTEKKATD  420
LRKMMRFEAS KNSQVAQPKG PSGTRSRGRK PTKKDVVDLR TLLIHCAQAV AADDRRTANE  480
LLKQIRQHAK PNGDGSQRLA YCFADGLEAR LAGTGSQLYH KLVAKRTTAS DMLKAYHLYL  540
AACPFKRLSH FLSNQTILSL TKNASKVHII DFGIYFGFQW PCLIRRLFKR EGGPPKLRIT  600
GIDVPQPGFR PTERIEETGQ RLAEYAEKIG VPFEYQGIAS KWETIRVEDL NIKKDEVVIV  660
NCLYRFRNLI DETVAVDSPR NRVLNTIRQV NPAIFIHGIV NGSYSIPFFI TRFREALFHF  720
SALFDMLETT VPRDDAQRAL IERDLFGREA LNVIACEGSD RVERPETYKQ WQVRNLRAGF  780
VQSPLNQDIV LKAKDKVKDI YHKDFVIDED SGWLLQGWKG RIIYAISTWK PNNN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15769RPRSHAHLARRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein