PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G30380.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 344aa MW: 37283.7 Da PI: 6.3521

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G30380.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	6.9e-09	254	287	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ e++ LA+++gL+ +q+ +WF N+R ++ ONIVA03G30380.2 254 WPYPSELEKAALAESTGLDAKQINNWFINQRKRH 287 58*****************************885 PP
2	ELK	34.7	3.9e-12	206	226	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 +++L++KYsgyL+sL++E+s ONIVA03G30380.2 206 TRRHLMNKYSGYLNSLWTEIS 226 69******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MEQLHLLLAS GGGSKASTTI TPFCLARDLA STSSPSPAAV AAPAPPPEAT SGSEQSIHGS 60 GTGLQSSEAM IKAKIMSHPL YPSLLRAFVD CKKVGAPPEV VGRLSSLAVV TDVPQYSGDR 120 WLPAQQPAAD PELDQFMETY CYMLTRYGQE LARPIQEAEE FFRGIEEQID SLALDEDVSY 180 DYEDEAAGGL PEKSAAFGEN EVTTTTRRHL MNKYSGYLNS LWTEISNKKK NSTGHLPRDA 240 RHKLLQWWHL HYRWPYPSEL EKAALAESTG LDAKQINNWF INQRKRHWKP TPPAMEYRSL 300 QPAGAASYGG ASAGASTSGG GSAVVRGMEG QHFTGGGAYP RGGP

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MEQLHLLLAS GGGSKASTTI TPFCLARDLA STSSPSPAAV AAPAPPPEAT SGSEQSIHGS  60
GTGLQSSEAM IKAKIMSHPL YPSLLRAFVD CKKVGAPPEV VGRLSSLAVV TDVPQYSGDR  120
WLPAQQPAAD PELDQFMETY CYMLTRYGQE LARPIQEAEE FFRGIEEQID SLALDEDVSY  180
DYEDEAAGGL PEKSAAFGEN EVTTTTRRHL MNKYSGYLNS LWTEISNKKK NSTGHLPRDA  240
RHKLLQWWHL HYRWPYPSEL EKAALAESTG LDAKQINNWF INQRKRHWKP TPPAMEYRSL  300
QPAGAASYGG ASAGASTSGG GSAVVRGMEG QHFTGGGAYP RGGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-66	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G30380.2