PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G30380.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 599aa MW: 65536.4 Da PI: 5.3944

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G30380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.6	2.1e-08	509	542	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ e++ LA+++gL+ +q+ +WF N+R ++ ONIVA03G30380.1 509 WPYPSELEKAALAESTGLDAKQINNWFINQRKRH 542 59*****************************885 PP
2	ELK	33.8	7.5e-12	206	226	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 +++L++KYsgyL+sL++E+s ONIVA03G30380.1 206 TRRHLMNKYSGYLNSLWTEIS 226 69******************8 PP
3	ELK	34.8	3.6e-12	462	483	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KYsgyL+sL+ E+s ONIVA03G30380.1 462 ELKSHLLNKYSGYLSSLWRELS 483 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MEQLHLLLAS GGGSKASTTI TPFCLARDLA STSSPSPAAV AAPAPPPEAT SGSEQSIHGS 60 GTGLQSSEAM IKAKIMSHPL YPSLLRAFVD CKKVGAPPEV VGRLSSLAVV TDVPQYSGDR 120 WLPAQQPAAD PELDQFMETY CYMLTRYGQE LARPIQEAEE FFRGIEEQID SLALDEDVSY 180 DYEDEAAGGL PEKSAAFGEN EVTTTTRRHL MNKYSGYLNS LWTEISNKKK NSTGHLPRDA 240 RHKLLQWWHL HYRWPYPSIS TPMEQQLPLL APDSKAATSS PLCLTLDNPT STSTSPAVPS 300 SAPPPAAALE PSRQSFHERE TDAIKAKIMS HPLYPALLRA FIDCQKVGAP PEVVGRLSAL 360 AGELDSRAED MHLQGQSSDP ELDEFMETYI DMLVSYRQEL TRPIQEADQF FRNMEAQIDS 420 FTLDDNGSEG GNSSEDEQEA GGGDMASAGL PEITIPCAED KELKSHLLNK YSGYLSSLWR 480 ELSKKKKKGK LPRDARQKLL HWWQLHYRWP YPSELEKAAL AESTGLDAKQ INNWFINQRK 540 RHWKPTPPAM EYRSLQPAGA ASYGGASAGA STSGGGSAVV RGMEGQHFTG GGAYPRGGP

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MEQLHLLLAS GGGSKASTTI TPFCLARDLA STSSPSPAAV AAPAPPPEAT SGSEQSIHGS  60
GTGLQSSEAM IKAKIMSHPL YPSLLRAFVD CKKVGAPPEV VGRLSSLAVV TDVPQYSGDR  120
WLPAQQPAAD PELDQFMETY CYMLTRYGQE LARPIQEAEE FFRGIEEQID SLALDEDVSY  180
DYEDEAAGGL PEKSAAFGEN EVTTTTRRHL MNKYSGYLNS LWTEISNKKK NSTGHLPRDA  240
RHKLLQWWHL HYRWPYPSIS TPMEQQLPLL APDSKAATSS PLCLTLDNPT STSTSPAVPS  300
SAPPPAAALE PSRQSFHERE TDAIKAKIMS HPLYPALLRA FIDCQKVGAP PEVVGRLSAL  360
AGELDSRAED MHLQGQSSDP ELDEFMETYI DMLVSYRQEL TRPIQEADQF FRNMEAQIDS  420
FTLDDNGSEG GNSSEDEQEA GGGDMASAGL PEITIPCAED KELKSHLLNK YSGYLSSLWR  480
ELSKKKKKGK LPRDARQKLL HWWQLHYRWP YPSELEKAAL AESTGLDAKQ INNWFINQRK  540
RHWKPTPPAM EYRSLQPAGA ASYGGASAGA STSGGGSAVV RGMEGQHFTG GGAYPRGGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	2e-81	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G30380.1