PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G27500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | NAC | ||||||||
Protein Properties | Length: 323aa MW: 34826.3 Da PI: 6.5102 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.2 | 1e-55 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeelv++yL++kv++ + + ++i++vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat+sgyWk+tgkdke+++ ONIVA03G27500.1 5 LPPGFRFHPTDEELVTYYLARKVSDFGFAT-RAIADVDLNKCEPWDLPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKEIFH 97 79*************************999.89***************999999**************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l g+kktLvfy+grapkg kt+Wvmheyrl ONIVA03G27500.1 98 -GGALAGMKKTLVFYRGRAPKGAKTSWVMHEYRL 130 .*******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MEEGLPPGFR FHPTDEELVT YYLARKVSDF GFATRAIADV DLNKCEPWDL PSKASMGEKE 60 WYFFSMRDRK YPTGIRTNRA TDSGYWKTTG KDKEIFHGGA LAGMKKTLVF YRGRAPKGAK 120 TSWVMHEYRL QSKFPYKPAK DEWVVCRVFK KLQCHLAKPR PPHDDVDGDG ASPPEMVDAS 180 SLGELGELDV SSILLGGFAP PSAELCHGGG GGDGFGAHRL DVGAYMSWLQ AAAAGNQGMF 240 QWPAATQAGL VGGTVFAAAH KAAGTMPFGG GCSQQQARDV GVSLANVGGG DALFGGAPLA 300 KVDMECGEQA PQLDMDDSTW RAF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 2e-92 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G27500.1 |