PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G27470.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 224aa MW: 23205.2 Da PI: 9.7894

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G27470.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.2	7.9e-23	115	159	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ ONIVA03G27470.1 115 PRMRWTTALHAHFVQAVELLGGHERATPKSVLELMNVKDLTLAHM 159 9*****************************************996 PP
2	Myb_DNA-binding	31.6	3.7e-10	116	158	1	39
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkq 39 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl + ONIVA03G27470.1 116 RMRWTTALHAHFVQAVELLGGHeraTPKSVLELMNvKDLTLAH 158 89**********************************9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MATTAATAPD LSLHISPPSP PDMAAGGETM EQLAEPKLCL GFGTAAAAAA EQYNNGGCNL 60 QQQQRLHQPS QIQRFKKSAS GGSPVCSGGA TGTGGVAAAR SGNGGGGGKR SSRAPRMRWT 120 TALHAHFVQA VELLGGHERA TPKSVLELMN VKDLTLAHMY RTVKGTTDRT CAEGHGQMRD 180 MGFLRRGGGG VDGFDVLGNT SSIAIANISF VWCGAIGFGR VRLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	2e-26	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G27470.1