PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G27230.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 449aa MW: 46805.2 Da PI: 10.639

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G27230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.6	3.5e-35	48	102	5	59
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 +cprC s++tkfCyynny++sqPr+fC+aCrryWt GG+lrnvP+Gg++rk+ ONIVA03G27230.1 48 REQCPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRP 102 579*************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MPGQVMEAAL QQLPASMASG SLLLPPACIQ HPLPAAAAAS GGVGGSSREQ CPRCASHDTK 60 FCYYNNYNTS QPRHFCRACR RYWTLGGSLR NVPIGGSTRK RPRPPVRRPP VHFAAAAAPP 120 HHHHHHHGGP LTPPPATSSS SQQAGLLGSL FALGAAPLLE GRVGVGFDLG LGLPGPGHHH 180 AVAGGGGPAA AVATSSSSSA AAPLLWPTGL LDSSSNNAET WRMAAGGMWP EFTAAAAQNI 240 RLVIDIGDTT IQVPLNGPTV VQNIGRQAAA AVAGDSSAGG VSEKTGGAGG GGGEEWMQEQ 300 DGLLCMRGRR CGRRGGCLPR PRDWFAALLA ADPAAAAVTR DQAGKAMLYL IVNTCTFATS 360 LAVLPDAVRR RRRLRVEEGH READHQHDDG RRAVRRGDVR ALRRRRLPAH GPFVGTVVAA 420 VTVVVVRCNL ALPFRGGDAG HGCSWVSRL

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MPGQVMEAAL QQLPASMASG SLLLPPACIQ HPLPAAAAAS GGVGGSSREQ CPRCASHDTK  60
FCYYNNYNTS QPRHFCRACR RYWTLGGSLR NVPIGGSTRK RPRPPVRRPP VHFAAAAAPP  120
HHHHHHHGGP LTPPPATSSS SQQAGLLGSL FALGAAPLLE GRVGVGFDLG LGLPGPGHHH  180
AVAGGGGPAA AVATSSSSSA AAPLLWPTGL LDSSSNNAET WRMAAGGMWP EFTAAAAQNI  240
RLVIDIGDTT IQVPLNGPTV VQNIGRQAAA AVAGDSSAGG VSEKTGGAGG GGGEEWMQEQ  300
DGLLCMRGRR CGRRGGCLPR PRDWFAALLA ADPAAAAVTR DQAGKAMLYL IVNTCTFATS  360
LAVLPDAVRR RRRLRVEEGH READHQHDDG RRAVRRGDVR ALRRRRLPAH GPFVGTVVAA  420
VTVVVVRCNL ALPFRGGDAG HGCSWVSRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	104	KRPRP
2	391	407	RRAVRRGDVRALRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	4e-25	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G27230.1