PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G26170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 486aa    MW: 52478.5 Da    PI: 3.9112
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G26170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.83.4e-2671451128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 
                      l pG+rF+P+d+elv++yL +++++k+l+l+ vi ++d ++v Pw+L +  +++ +e +fF++++ k+ +gkr++r +   g+W+ +    d e
  ONIVA03G26170.1   7 LLPGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTLLAD-HTRGDEAFFFAEARAKNGKGKRQKRtVEGGGFWQGQRMavDGE 99 
                      579***************************999**************743.456789*******************555599**9665522222 PP

              NAM  92 vlsk..........kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                                    +  +     ++ k +L f+ ++ ++g ++ Wvmhey++
  ONIVA03G26170.1 100 R--LvvpgddggggG--DegleiTWRKYVLSFF-AEGERG-SSGWVMHEYAV 145
                      2..133456666550..155565899999****.444454.89*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MAGADGLLPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTLLADHTRG  60
DEAFFFAEAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LVVPGDDGGG GGDEGLEITW  120
RKYVLSFFAE GERGSSGWVM HEYAVTSPAD LASSQLRLYR VRFSGHGKKR KREPQCLDSH  180
DDDDGGDQES ATHRRAVAET TLFDGYVPRP AADGTDQGTY GVIDGESSLA SHCLPDQIVP  240
PAEEADATAG VENPLLDEER WSPPQPALVK QNSYDLMAIS SLLFSDLPDR IDDDDLSVSQ  300
TEGTELSEQG SSGVIDDDYW READATGGAE REEIALLDEE RCPQPQPAPP TAALVPPLQG  360
QSSYDLMADS SLLFADLPGS IDDDELQRSL RASDMPDQFL AQTEEAGAGG GGGAAAALNK  420
QSNSSPLGVE VPMALSDLES PESMPLSDLE FPESIDEVLS YIDFTTDDTS CLDFDMDELF  480
SDMPAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.16e-14NAC family protein