PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G26020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 372aa MW: 36857 Da PI: 8.5769

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G26020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.7e-39	44	104	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+s+ ONIVA03G26020.1 44 QEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRSR 104 57889*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MAPAAGDDAV VPRKGAGGGG TTTPPQPPPA QQQQQQPLPP PPPQEQGLRC PRCDSPNTKF 60 CYYNNYSLSQ PRHFCKTCRR YWTKGGALRN VPVGGGCRKN KRSRSAAAAS RLSLNLPTVE 120 GIGGAAADPA AAAAARLGFL GGGTTMMMSS STSPLGGAAA AVADFQQGGA VGMLPLPRLQ 180 SPAGGGVGHH QYVPFGEWPS GDIAGGNAVN GGGGHGAVSS TIASSIESLS FINQDLHWKL 240 QQQRLATMFL GPPGSASAAA QANDGGGNGA QATASGHAAG GGGGAFMHMA GSVPSMEAAM 300 PSATSWFMDS CSYGLPSPPP PATAAVAATT SSNLNSGGRS SGGGGGGDDN ATSNCGSAIP 360 AWGDISTFAM LP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MAPAAGDDAV VPRKGAGGGG TTTPPQPPPA QQQQQQPLPP PPPQEQGLRC PRCDSPNTKF  60
CYYNNYSLSQ PRHFCKTCRR YWTKGGALRN VPVGGGCRKN KRSRSAAAAS RLSLNLPTVE  120
GIGGAAADPA AAAAARLGFL GGGTTMMMSS STSPLGGAAA AVADFQQGGA VGMLPLPRLQ  180
SPAGGGVGHH QYVPFGEWPS GDIAGGNAVN GGGGHGAVSS TIASSIESLS FINQDLHWKL  240
QQQRLATMFL GPPGSASAAA QANDGGGNGA QATASGHAAG GGGGAFMHMA GSVPSMEAAM  300
PSATSWFMDS CSYGLPSPPP PATAAVAATT SSNLNSGGRS SGGGGGGDDN ATSNCGSAIP  360
AWGDISTFAM LP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	345	GGRSSGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-30	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G26020.1