PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G23070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 523aa MW: 54040.7 Da PI: 6.6528 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 181.8 | 4.8e-56 | 134 | 520 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn......sseelaal.kl.... 83 ++lL cA av++g+l+++q+l l el s +gd+++Rlaa+ ++ALa+ l ++ ++a+++ + se+ +l ONIVA03G23070.1 134 EQLLNPCAVAVEAGNLSRVQHLFYVLGELESFSGDANHRLAAHGLRALARWLPAaVGPAAAAAVRVPPCSERPtpafaaA------EpRLfras 221 689*************************************************9867777777776555554443334321......22112335 PP GRAS 84 ...fsevsPilkfshltaNqaIleavege......ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg........skeel 158 f+evsP++ + + +aN aI +a + +H++D+++s+G+QWp+Ll++L+ +p + ps+R+T+vg+ ++ + ONIVA03G23070.1 222 lirFHEVSPWFALPNALANAAIAQASTCGaagatpRPLHVVDLGVSHGVQWPTLLESLTRQPggRALPSVRLTVVGPGATAtspaapfsASPPG 315 589*********************96533345567889************************544579********987778899999878888 PP GRAS 159 eetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.....ad 247 L ++A++++++++++ a++l+d + gEal+V+l+++l + ++er+evL+ ++l+P++vv++e + + ONIVA03G23070.1 316 YDFSPHLLRYAKSINLDLRISR--ASTLDDA----VPGDDGEALVVCLQFRLGHAA------AEERREVLRKARGLNPELVVLSELDsgvgvVG 397 99999****************8..6777776....66789**********999997......445899******************94433222 PP GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll 341 +++ + +f+ le + +++s++a + + + + Er+ll+ e+ ++a++ + + e e Wrer+ +aGF+++p++ +a+++a++ll ONIVA03G23070.1 398 GDGGIAAGEFAARLELLWRFLESTSAAF----KGKDVEERRLLEAEAGAILAAADVA--AAGEGREGWRERMAAAGFEEAPFGAEAVESARSLL 485 234467889***************9997....6777788888888899999998887..788999***************************** PP GRAS 342 rkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374 rk++ +++++ + +++v l Wk++p+ ++S Wr ONIVA03G23070.1 486 RKYDsGWEMSAPSPAAAAVaLRWKGQPVSFCSLWR 520 ****6555666666666667**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
MSYHGQERHG GNGLDWFEES MSSLLAADVD LAGGGGDAGG GGYAWWWAAS PAAQQDDIGS 60 VVAQTLSPPS TAAPAAASPS IASPAASSPP DVPSSSSKKR KSPAHRAPGH TGGKKGGGGK 120 GGGGGSDRDM RWAEQLLNPC AVAVEAGNLS RVQHLFYVLG ELESFSGDAN HRLAAHGLRA 180 LARWLPAAVG PAAAAAVRVP PCSERPTPAF AAAEPRLFRA SLIRFHEVSP WFALPNALAN 240 AAIAQASTCG AAGATPRPLH VVDLGVSHGV QWPTLLESLT RQPGGRALPS VRLTVVGPGA 300 TATSPAAPFS ASPPGYDFSP HLLRYAKSIN LDLRISRAST LDDAVPGDDG EALVVCLQFR 360 LGHAAAEERR EVLRKARGLN PELVVLSELD SGVGVVGGDG GIAAGEFAAR LELLWRFLES 420 TSAAFKGKDV EERRLLEAEA GAILAAADVA AAGEGREGWR ERMAAAGFEE APFGAEAVES 480 ARSLLRKYDS GWEMSAPSPA AAAVALRWKG QPVSFCSLWR PAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 119 | GGKKGGGG |
2 | 116 | 123 | GGKKGGGG |
3 | 117 | 124 | GGKKGGGG |
4 | 118 | 125 | GGKKGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13840.1 | 7e-52 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G23070.1 |