PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G22460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 88aa MW: 9347.56 Da PI: 4.5722 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 47.1 | 4e-15 | 3 | 56 | 165 | 219 |
GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvs 219 L+k Ae+l+vpf+fn+ v++rl++l++e+Lrvk+gEala++++lqlh ll+++ + ONIVA03G22460.1 3 LTKEAERLDVPFQFNP-VVSRLDALDVESLRVKTGEALAICFSLQLHCLLASDDD 56 99**************.7*******************************976654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MALTKEAERL DVPFQFNPVV SRLDALDVES LRVKTGEALA ICFSLQLHCL LASDDDATAG 60 AGGDKERRSP ESGLSPSKSR ADAFLGAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 3e-19 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G22460.1 |