PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G22450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 214aa MW: 23940.6 Da PI: 10.0342 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 71.9 | 1.2e-22 | 1 | 98 | 239 | 345 |
GRAS 239 vvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek 332 +vv+eqe + + erf+e l+yy+alfd+le++ +r s er+ vEr llg+ei+n+v c g e rerhe rle aGF+ vpls++ ONIVA03G22450.1 1 MVVTEQEPHA--AGLTERFVEVLNYYAALFDCLEVGGARGSVERTRVERWLLGEEIKNIVVCDGGELRERHE-------RLEGAGFGRVPLSYY 85 6777887655..899********************************************************9.......999************ PP GRAS 333 aakqaklllrkvk 345 a qa+++ + ONIVA03G22450.1 86 ALLQARRVAQGLR 98 ******9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MVVTEQEPHA AGLTERFVEV LNYYAALFDC LEVGGARGSV ERTRVERWLL GEEIKNIVVC 60 DGGELRERHE RLEGAGFGRV PLSYYALLQA RRVAQGLRLR RLQGPGGEGQ LLPLLARSRP 120 LLRLRMARPP LRRLAPLAAI DASPLLPRHC YLALLPAASP PYSSRRRLAL LSIRTAQSRE 180 REDEGREEGK ERVGLFGQAD RCCLRRSHAD SAVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 5e-16 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G22450.1 |