PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G21780.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 424aa    MW: 46767.9 Da    PI: 6.1892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G21780.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000273734121054
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +rRR+ri +  + Lr+++P      +k  +  ++L +A+ Y+k+L
  ONIVA03G21780.2 373 KRRRERIQETVAALRKIVPGG---IAK--DATAVLDEAICYLKYL 412
                      9******************97...333..3458999999999999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MRWLALSVDI FRKGISLNLY CRSLKFGIED LVAGIAVWVS VVAWQFFQGE RAGVLMVWQP  60
VAQTRFRVFK HENGIAVRVI ACFQPSQDCQ AEYFRHLLKP KILFAGCFLM GEKVNPWCHW  120
SNPPWTESSA NNLHPPDVSL DNTNSVALPT YLNSDGYIYS GVAASMPSIA ASVTDRPVSF  180
SSRFVTTLVP SVGLSTAETL RKRPLVFFHN VNNTFTVGPL LSKGTLDTVP ELQGSNETNV  240
TDVGAQNTEC MHENTEEIDA LLCSDSDEGC LKVQELNNRV RKYPMQNDTM SVESVASAGA  300
SQPAKKRRLS SGTDRSVVDT ASSARPDHSV DQKHLSHDDD AQSCCIGEVE SDHQFALREG  360
EEAEGDDGPD DRKRRRERIQ ETVAALRKIV PGGIAKDATA VLDEAICYLK YLKLKVKTLG  420
AVSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1372376RKRRR