PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G21570.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CAMTA

Protein Properties

Length: 1031aa MW: 115426 Da PI: 6.3764

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G21570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177.9	1.3e-55	22	137	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 + +krwl+++ei++iL n+++++l+ e+++rp sgsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+++vl+cyYah+een++fqr ONIVA03G21570.1 22 EARKRWLRPTEICEILSNYRSFSLSPEPPNRPGSGSLFLFDRKTLRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSIDVLHCYYAHGEENENFQR 115 459***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+ywlLee++++ivlvhylevk ONIVA03G21570.1 116 RTYWLLEEDFTHIVLVHYLEVK 137 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1031 aa Download sequence
MAETRKFLMP NQPPDISQMV LEARKRWLRP TEICEILSNY RSFSLSPEPP NRPGSGSLFL 60 FDRKTLRYFR KDGHNWRKKK DGKTVKEAHE KLKAGSIDVL HCYYAHGEEN ENFQRRTYWL 120 LEEDFTHIVL VHYLEVKGVK QSFSRAKEEI MQLSGADSPS CSNSITSQNQ MTPQIMDAAE 180 SPISGQISEY EGAEPAKFGA ADNCRASSRY NPLIEMQQPL DGIVMDNILY PSSSAICNQV 240 SGYHGELPPG TSNLNGHTFS HSDIARMFDD SSSGLRDISR TLFDSMPYDE HFSGYANGFM 300 EPTLHSSFSM IEANNLEDSS LLETYTSEAL YTNNLSQKEA DALSFAGISS PEVNGNKYTE 360 GSTKHPLLKQ LSLDLFKIES SGLKKHDSFS RWMSKELGEV VDLGIKSSSD ALWSSIEIVN 420 AADGPSAPTN EQLDAYAVSP SLAQDQLFSI LDISPSCSYI GLKTKVLVTG TFLASKENVE 480 NCKWSCMFGD VEVPAEVLAD GSLRCYAPEH QSGRVPFYVT CSNRIACSEV REFEYRDSDA 540 QYMETSHSQA NGINEMHLQI RLEKLLTLGP DDNQLLVCGN EKLELINAIN SLMLDEKWSD 600 QGSPSGSKDV VTPRNQSLKK LMKEKLHCWL IYKIYDCEKG PNILGKEGQG IIHLAAALGF 660 DWAIRPILVA GVNVNFRDAH GWTALHWAAS CGRERTVGVL IANGAAAGAL TDPTSEFPSG 720 RTPADLASTN GHKGIAGFLA ESALTSHLSA LTLKESKDSN AEEACRLTIP EDLPEMNYGQ 780 LAVQDSHAES LKDSLSAVRK SAQAAARIFQ AFRVESFHRK KVVEYGDDDC GLSDEHTFSL 840 ISLQKVKQGQ HDTRLHSAAV RIQNKFRGWK GRKEFMIIRQ RIVKLQAHVR GHQVRKNYKK 900 VVWSVGIVEK VILRWRRKGR GLRGFRPEKQ LEGQTQIQPA KTEDEYDYLQ DGRRQAEGRL 960 QRALDRVRSM TQYPEAREQY RRLTTCVAEM QQSRMMQDEM LSEAAGADGS DFMNGLEDLI 1020 CRDDPQMSAI W

Sequence ? help Back to Top

Protein Sequence Length: 1031 aa Download sequence

MAETRKFLMP NQPPDISQMV LEARKRWLRP TEICEILSNY RSFSLSPEPP NRPGSGSLFL  60
FDRKTLRYFR KDGHNWRKKK DGKTVKEAHE KLKAGSIDVL HCYYAHGEEN ENFQRRTYWL  120
LEEDFTHIVL VHYLEVKGVK QSFSRAKEEI MQLSGADSPS CSNSITSQNQ MTPQIMDAAE  180
SPISGQISEY EGAEPAKFGA ADNCRASSRY NPLIEMQQPL DGIVMDNILY PSSSAICNQV  240
SGYHGELPPG TSNLNGHTFS HSDIARMFDD SSSGLRDISR TLFDSMPYDE HFSGYANGFM  300
EPTLHSSFSM IEANNLEDSS LLETYTSEAL YTNNLSQKEA DALSFAGISS PEVNGNKYTE  360
GSTKHPLLKQ LSLDLFKIES SGLKKHDSFS RWMSKELGEV VDLGIKSSSD ALWSSIEIVN  420
AADGPSAPTN EQLDAYAVSP SLAQDQLFSI LDISPSCSYI GLKTKVLVTG TFLASKENVE  480
NCKWSCMFGD VEVPAEVLAD GSLRCYAPEH QSGRVPFYVT CSNRIACSEV REFEYRDSDA  540
QYMETSHSQA NGINEMHLQI RLEKLLTLGP DDNQLLVCGN EKLELINAIN SLMLDEKWSD  600
QGSPSGSKDV VTPRNQSLKK LMKEKLHCWL IYKIYDCEKG PNILGKEGQG IIHLAAALGF  660
DWAIRPILVA GVNVNFRDAH GWTALHWAAS CGRERTVGVL IANGAAAGAL TDPTSEFPSG  720
RTPADLASTN GHKGIAGFLA ESALTSHLSA LTLKESKDSN AEEACRLTIP EDLPEMNYGQ  780
LAVQDSHAES LKDSLSAVRK SAQAAARIFQ AFRVESFHRK KVVEYGDDDC GLSDEHTFSL  840
ISLQKVKQGQ HDTRLHSAAV RIQNKFRGWK GRKEFMIIRQ RIVKLQAHVR GHQVRKNYKK  900
VVWSVGIVEK VILRWRRKGR GLRGFRPEKQ LEGQTQIQPA KTEDEYDYLQ DGRRQAEGRL  960
QRALDRVRSM TQYPEAREQY RRLTTCVAEM QQSRMMQDEM LSEAAGADGS DFMNGLEDLI  1020
CRDDPQMSAI W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G21570.1