PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G17050.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family G2-like
Protein Properties Length: 428aa    MW: 46656.7 Da    PI: 6.6151
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G17050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.63.2e-34216270155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+r+rWtpeLHe+Fv+av++LGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+
  ONIVA03G17050.1 216 KQRMRWTPELHESFVHAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 270
                      79****************************************************8 PP
2Myb_DNA-binding53.55.4e-17218269148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e +v+av++lGg    t+k + + m   g+t +++ks++qky+
  ONIVA03G17050.1 218 RMRWTPELHESFVHAVNKLGGSekaTPKGVLKLMKvDGLTIYHVKSHLQKYR 269
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MSSSLPILPK SLKDIPRSHN TQNILMPGQL PNDSMPLHQS ATQSSISHPR ASVVRSSYSA  60
MLGYAANPID SVSSHEGHFM AAPFISQSSN AEMLQSLCNN NTHGGHTVPT FFPAPACGAP  120
DYMDTITVPD NHTQSGSSTV TSDAAKQNEW WADIMNDDWK DILDATATDS QSKSMAQPSN  180
SAASQPAFNQ STSSHSGDIC PVTSPPPNNS NASASKQRMR WTPELHESFV HAVNKLGGSE  240
KATPKGVLKL MKVDGLTIYH VKSHLQKYRT ARYKPDLSEG KTQEGKTTDE LSLDLKASMD  300
LTEALRLQME VQKRLHEQLE IQRKLQLRIE EQGKYLQKMF EKQCKSSTQS VQDPSSGDTA  360
TPSEPSNSVD KDSEAALDPN RIGDNHPKNS TNVGANLKTA ATESPDSPVI ATDGSELPQE  420
KRRRVHES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1421425KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.13e-68G2-like family protein