PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G16490.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 210aa    MW: 23642.2 Da    PI: 8.2124
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G16490.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.41.9e-203394259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59
                     +Dg++WrKYG K++++ +fpr YYrCt++   +Cp++k++++++ +dp +  +tY +eH+++
  ONIVA03G16490.3 33 NDGHQWRKYGEKKINNCNFPRYYYRCTYKdnmNCPATKQIQQKDySDPPLYSVTYYNEHTCN 94
                     8***************************99999*******976538**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSPVPSPHQS HHLGHGSRKE KRMRKVDTFA PHNDGHQWRK YGEKKINNCN FPRYYYRCTY  60
KDNMNCPATK QIQQKDYSDP PLYSVTYYNE HTCNSAFLPL SPSEFQLQTA SGKAVSICFE  120
SSGAQEPMTN ASSPSSSAAR RSTPSENKNQ PLPRHSEAYS WGVGVVEQKP SCTELQSCST  180
ECQDAFSAGT IPEETVDAGR FGSIRFFHFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.17e-19WRKY family protein