PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G11430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 102aa MW: 10918.7 Da PI: 7.3579 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24 | 9e-08 | 2 | 46 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ E ++ +a +++ + +W+++a+ +g g+t+ +++ ++ ONIVA03G11430.1 2 DWSRAENARFEQALAMYDRDtpgRWERVAAVVGGGKTADDVRRHF 46 6*****************99************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MDWSRAENAR FEQALAMYDR DTPGRWERVA AVVGGGKTAD DVRRHFDLLV DDCGSIESGN 60 YGYPGTGAGA GRGSGNGNGN GRDKNNDGNT NRRQSRANGP QT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 5e-20 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G11430.1 |