PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G10690.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 719aa MW: 78734.1 Da PI: 6.705

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G10690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	14	56	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E++ + +a +q G++ +++I +++ ++ q++++++ + ONIVA03G10690.1 14 AWTRQEEQNFFNALRQVGKN-FEKITLRVQ-SKSKDQVRHYYYRL 56 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MSLVRSAPAR QWAAWTRQEE QNFFNALRQV GKNFEKITLR VQSKSKDQVR HYYYRLVRRM 60 KKLLGPEFSL DAKNSKDTIA AMLCWWSLLE KFSCSASKLH LKPRRFKTFV EALGNQLLKD 120 RNKTRKKCPR GDVCLSSSSS AVNRTPGNES FSVKLLAVDV SNGSKVGSSK GSFFKKVTEP 180 NCSNKSGATK GDLSATRTVK QKRRAGGVVA SAAYKKWERA AMAGVSLVAD AAEELERNTV 240 NADARMLSPS SSNACTVDGL GTNHIKEADQ QAPAKLKLQL FPINEATRKA LEKDEHNPHL 300 ELTLSARKKI SSVLEHLNRK WGNSNIASGE LLLFPYCAHQ EDLATYQRWT TKDTVAVADV 360 FRSVNSPSVF RLRYGWFSLA ELEAGVSEIS LTHFENCLIP EDIHAKSPSE ACVQKDGNSL 420 SSCAPEQHPC GSKDQSALLL AMPSSTGKSA QVPEQCIDVL PSQFGRQNQD QVTTNQVFEV 480 DQGMDCAAVS EGEWADTLTD ISVGYLLTEA SRGANTDCPG TSVVKNTLLL ENPCSYDSFD 540 AAVALHASRY KSAEQPALAS HSTIWGAEET CDAFSFNLPA SRKREGSNNS ASSSPDSDSD 600 VHPSNSEGFQ CFLQDLAGAA VAHNPCIDDA KDIESLCAES PPRSDHDSAP KDQSLADLYW 660 PDSLGPLDLD IPSATYHADD LLLGDSQNSW NRMMANSLDA FRNLSFFTAD KNDSIPSIM

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MSLVRSAPAR QWAAWTRQEE QNFFNALRQV GKNFEKITLR VQSKSKDQVR HYYYRLVRRM  60
KKLLGPEFSL DAKNSKDTIA AMLCWWSLLE KFSCSASKLH LKPRRFKTFV EALGNQLLKD  120
RNKTRKKCPR GDVCLSSSSS AVNRTPGNES FSVKLLAVDV SNGSKVGSSK GSFFKKVTEP  180
NCSNKSGATK GDLSATRTVK QKRRAGGVVA SAAYKKWERA AMAGVSLVAD AAEELERNTV  240
NADARMLSPS SSNACTVDGL GTNHIKEADQ QAPAKLKLQL FPINEATRKA LEKDEHNPHL  300
ELTLSARKKI SSVLEHLNRK WGNSNIASGE LLLFPYCAHQ EDLATYQRWT TKDTVAVADV  360
FRSVNSPSVF RLRYGWFSLA ELEAGVSEIS LTHFENCLIP EDIHAKSPSE ACVQKDGNSL  420
SSCAPEQHPC GSKDQSALLL AMPSSTGKSA QVPEQCIDVL PSQFGRQNQD QVTTNQVFEV  480
DQGMDCAAVS EGEWADTLTD ISVGYLLTEA SRGANTDCPG TSVVKNTLLL ENPCSYDSFD  540
AAVALHASRY KSAEQPALAS HSTIWGAEET CDAFSFNLPA SRKREGSNNS ASSSPDSDSD  600
VHPSNSEGFQ CFLQDLAGAA VAHNPCIDDA KDIESLCAES PPRSDHDSAP KDQSLADLYW  660
PDSLGPLDLD IPSATYHADD LLLGDSQNSW NRMMANSLDA FRNLSFFTAD KNDSIPSIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-166	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G10690.1