PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G10680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | G2-like | ||||||||
Protein Properties | Length: 250aa MW: 27382.7 Da PI: 8.2372 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 43.2 | 8.6e-14 | 82 | 123 | 1 | 50 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL 50 k+r++W+peLH+rFv +++L G++ lmkv+gLt ++vkSHL ONIVA03G10680.1 82 KARRCWSPELHRRFVATLQRLDGPQ--------GLMKVDGLTDDEVKSHL 123 68*******************9998........79**************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MSISNHHVSN AFMPLATSPV FAKSPEKAAT ATPLPAAVPD LSLSSPACPA APASVTSSAV 60 TDVARVQRRR QQQQQQQAVQ RKARRCWSPE LHRRFVATLQ RLDGPQGLMK VDGLTDDEVK 120 SHLHVVQSQL LLLQPKKIAI CRWQQFDTPL LEKKNSRISK QIVKKYRLHT RRASDCGGDS 180 GGLWTPPPEQ YTTSQHNMSP ALTVSSSHAV SVTAGDSCDG GEEEEEEEDD GKSESYSWEM 240 QNGARASLSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 2e-12 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G10680.1 |