PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G06360.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 298aa    MW: 31864 Da    PI: 6.5073
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G06360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.5e-21112162256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a++ a+ +l+ge
  ONIVA03G06360.1 112 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDSAAFRLRGE 162
                      59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MATTVDWCGR GSNLPAAMYD MVVDSKELMG ALAPSMVSFS YPCSEQSASS LLAGANYLTP  60
AQVLHVQAQL QRLRRPGAAS GCLAAAPPLP MKRHGAVAVA AAAAAARAPV KLYRGVRQRH  120
WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDSAAFRLR GESARLNFPE LRRGGAHLGP  180
PLHAAVDAKL HAICHGMDLP QPQPQTQSNA TTTTMSTTAT NTPSPFFSSE SPVVKSEPVC  240
SASESSSSAD GDVSSTGSSD VVPEMQLLDF SEAPWDESES FLLHKYPSLE IDWDAILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-43ERF family protein