PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G05120.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HD-ZIP

Protein Properties

Length: 363aa MW: 39209.3 Da PI: 6.9045

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G05120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.6e-18	127	180	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rqV +WFqNrRa++k ONIVA03G05120.1 127 KKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 180 4568999**********************************************9 PP
2	HD-ZIP_I/II	128.9	2e-41	126	217	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy+aLkr++da+k+en++L +++++L++e+ ONIVA03G05120.1 126 EKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIV 217 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MASNGMASSP SSFFPPNFLL HMAQQQAAPP HDPQEHHHHH HHGHHGHHHE QQQHHHHLGP 60 PPPPPPHPHN PFLPSSAQCP SLQEFRGMAP MLGKRPMSYG DGGGGGDEVN GGGEDELSDD 120 GSQAGEKKRR LNVEQVRTLE KNFELGNKLE PERKMQLARA LGLQPRQVAI WFQNRRARWK 180 TKQLEKDYDA LKRQLDAVKA ENDALLNHNK KLQAEIVALK GREAASELIN LNKETEASCS 240 NRSENSSEIN LDISRTPPPD AAALDAAPTA HHHHHGGGGG GGGGGGMIPF YTSIARPASG 300 GGVDIDQLLH SSSGGAGGPK MEHHGGGGNV QAASVDTASF GNLLCGVDEP PPFWPWPDHQ 360 HFH

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MASNGMASSP SSFFPPNFLL HMAQQQAAPP HDPQEHHHHH HHGHHGHHHE QQQHHHHLGP  60
PPPPPPHPHN PFLPSSAQCP SLQEFRGMAP MLGKRPMSYG DGGGGGDEVN GGGEDELSDD  120
GSQAGEKKRR LNVEQVRTLE KNFELGNKLE PERKMQLARA LGLQPRQVAI WFQNRRARWK  180
TKQLEKDYDA LKRQLDAVKA ENDALLNHNK KLQAEIVALK GREAASELIN LNKETEASCS  240
NRSENSSEIN LDISRTPPPD AAALDAAPTA HHHHHGGGGG GGGGGGMIPF YTSIARPASG  300
GGVDIDQLLH SSSGGAGGPK MEHHGGGGNV QAASVDTASF GNLLCGVDEP PPFWPWPDHQ  360
HFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	183	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-70	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G05120.1