PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G03810.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

E2F/DP

Protein Properties

Length: 444aa MW: 48429.9 Da PI: 10.6409

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G03810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	65.7	6.2e-21	219	279	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e+ g++t+ne ++ d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg ONIVA03G03810.1 219 GRGLRQFSMK---VCEKVESkGRTTYNE--QQY---DEKNIRRRVYDALNVLMAMEIISK-DKKEIQWKG 279 689*****...*999**9..566...8899****************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MRPPGTALGF GLISGAGSRR VTEPKPPNFI RKKIKIKRKK QKRKEEKRSS SPRLCPPSRR 60 FLISFSPSNL PPLCRFRVSA LQLLPNSGPR FARSRPPMVS GVAHRPDDDG GRAASTFQRP 120 PQPAGARPSL ATPPPSGGAQ SASTSGGSAG SPSSRSEQHV PAAAGMAAGA AAASTPISEN 180 TFLRLNDLDI HGDDAPSSQA PTSKKKKRGA RAVGPDKGGR GLRQFSMKVC EKVESKGRTT 240 YNEQQYDEKN IRRRVYDALN VLMAMEIISK DKKEIQWKGL PRTSINDIED LQTELVGLKS 300 RIEKKNTYLQ ELQDQLIQRN EQLYGSGNIP SGGVALPFIL VQTRPHATVE VEISEDMQLV 360 HFDFNSTPFE LHDDSFVLKA MSSCGEEQID GIHDLISNGG ESSSMPNIYR QQVQQPARST 420 NGTARLPSSP PIPGILKGRV KHEH

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MRPPGTALGF GLISGAGSRR VTEPKPPNFI RKKIKIKRKK QKRKEEKRSS SPRLCPPSRR  60
FLISFSPSNL PPLCRFRVSA LQLLPNSGPR FARSRPPMVS GVAHRPDDDG GRAASTFQRP  120
PQPAGARPSL ATPPPSGGAQ SASTSGGSAG SPSSRSEQHV PAAAGMAAGA AAASTPISEN  180
TFLRLNDLDI HGDDAPSSQA PTSKKKKRGA RAVGPDKGGR GLRQFSMKVC EKVESKGRTT  240
YNEQQYDEKN IRRRVYDALN VLMAMEIISK DKKEIQWKGL PRTSINDIED LQTELVGLKS  300
RIEKKNTYLQ ELQDQLIQRN EQLYGSGNIP SGGVALPFIL VQTRPHATVE VEISEDMQLV  360
HFDFNSTPFE LHDDSFVLKA MSSCGEEQID GIHDLISNGG ESSSMPNIYR QQVQQPARST  420
NGTARLPSSP PIPGILKGRV KHEH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	44	RKKIKIKRKKQKRK
2	37	48	KRKKQKRKEEKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-112	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G03810.1