PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G03740.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 1477aa MW: 161701 Da PI: 5.9333

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G03740.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.7e-05	1367	1392	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C C+++F +k +L+ H+r+ + ONIVA03G03740.2 1367 FQCDieFCDMTFETKAELRAHQRNiC 1392 899999*****************877 PP
2	zf-C2H2	12.6	0.00043	1392	1414	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+Fs++ +LkrH+ +H ONIVA03G03740.2 1392 CTdeSCGKRFSSHKYLKRHQCVH 1414 77778***************998 PP
3	zf-C2H2	13.7	0.00019	1450	1476	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ dCg+sF+ s++ rH ++ H ONIVA03G03740.2 1450 YKCSapDCGQSFRYVSDYSRHRKKfnH 1476 99********************98666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1477 aa Download sequence
MPPQPPPAAS ASASAPDPAV PAWLRGLPRA PEYRPTESEF ADPIAFLSRV EREAAAYGIC 60 KVIPPHPRPS RRFVFAHLNR SLVSSCDAPA PSPAAASDSS IPPSSSSPPP ASAAVFTTRH 120 QELGNPRRGR PTPQVLKQVW QSGERYTLDQ FESKSRAFSK THLAGLHEPT ALAVESLFWK 180 ASADRPIYIE YANDVPGSGF AAPVQLQRKK KQKRETAPMD EWEKSSGWRL SNSPWNLQAI 240 ARAPGSLTRF MPDDVPGVTS PMVYIGMLFS WFAWHVEDHD LHSLNFLHTG APKTWYAVPG 300 DRAVELEEVI RVHGYGGNTD RIASLAVLGE KTTLMSPEVL IDNGVPCCRL VQYPGEFVVT 360 FPRAYHVGFS HGFNCGEAAN FATPQWLKFA KEAAVRRAVM NYLPMLSHQQ LLNPRELLSG 420 IRTSRLRDRK KEDRELLVKQ EFLQDMISEN ELICSFLGKK SVDNVVLWEP DLLPSLTALH 480 PCSSCSKAPE KKGEDGPRIG STQSSSKDDS SSDGTACMTG TQSKGLSMDS KQAPEGEKLD 540 TDDGDDLPFD LSIDSGSLTC VACGILGYPF MAILQPSRKA LEEISLVDKE RYKLSCEKEI 600 CSNVLPCSPN DGSSGCPLIA NRSSSPVENA NLSHQDVKPI RSDISLMGKE FNGTLGKHIG 660 TSCSCSSENT IHPYGDTETP EKKIPSDCPG SELSKQSGRG DVNVPDVEGS EETISWNTGC 720 AFARPRIFCL QHALEIEELL ASKGGVHALI ICHADYVKLK ALAISIAEEI EFQFDYKDVA 780 LANASKSNLH LINISIDDEG YEEEGTDWTS RMGLNLKHSS KIRKETSESQ EQPPLSFWGL 840 FSKPSPISVV SNLKWLCRKA RTPYKVIGYA SSPDVVATPD KVKPAVTKTQ IDTSGNAHEN 900 IGSEQTLQQD CVLQESNDVA DMCKRPKVND QDGHSLINIP IAVAEYPMMH QVCERPVSVS 960 ACDDPICSFD SQDSPTTVAV SAGKPTREQC GAESTELSTV KQFLDNGLIA EGGSMNFISN 1020 HEHLESDNAT SVCKDEQLQV QQDQLAMVLC NNPNTELVAG ELHGGAASST LENEDSCGNT 1080 SYCSDTVLKN SKPDTDDQPE TCDRSVVLVT PKSSCDQMIS SSDRSCSLTL DCPVSTDAAF 1140 SSEKLSMAHD LMGSELQAVH NSKAEVAASL TDVKGAKLNS IHTAQLPHES PSSDFIISEG 1200 AQSASTTAIP RKNGTSMHTE SNSIDILLGV LADESKVSSG KDEVGKASLT LMTLAGNDQS 1260 ADDVTQDEVA EITDPSHGFC ASDIVSRSIG SSNRTNIICY ARRKHKRKSG SEFNINSPQS 1320 LGSFVRSPCE SLRPRTRPAI VEDMTNETKT AEASTANKRK KAKVEAFQCD IEFCDMTFET 1380 KAELRAHQRN ICTDESCGKR FSSHKYLKRH QCVHRDERPF KCPWDGCPMT FKWLWAQTEH 1440 IRVHTGERPY KCSAPDCGQS FRYVSDYSRH RKKFNHY

Sequence ? help Back to Top

Protein Sequence Length: 1477 aa Download sequence

MPPQPPPAAS ASASAPDPAV PAWLRGLPRA PEYRPTESEF ADPIAFLSRV EREAAAYGIC  60
KVIPPHPRPS RRFVFAHLNR SLVSSCDAPA PSPAAASDSS IPPSSSSPPP ASAAVFTTRH  120
QELGNPRRGR PTPQVLKQVW QSGERYTLDQ FESKSRAFSK THLAGLHEPT ALAVESLFWK  180
ASADRPIYIE YANDVPGSGF AAPVQLQRKK KQKRETAPMD EWEKSSGWRL SNSPWNLQAI  240
ARAPGSLTRF MPDDVPGVTS PMVYIGMLFS WFAWHVEDHD LHSLNFLHTG APKTWYAVPG  300
DRAVELEEVI RVHGYGGNTD RIASLAVLGE KTTLMSPEVL IDNGVPCCRL VQYPGEFVVT  360
FPRAYHVGFS HGFNCGEAAN FATPQWLKFA KEAAVRRAVM NYLPMLSHQQ LLNPRELLSG  420
IRTSRLRDRK KEDRELLVKQ EFLQDMISEN ELICSFLGKK SVDNVVLWEP DLLPSLTALH  480
PCSSCSKAPE KKGEDGPRIG STQSSSKDDS SSDGTACMTG TQSKGLSMDS KQAPEGEKLD  540
TDDGDDLPFD LSIDSGSLTC VACGILGYPF MAILQPSRKA LEEISLVDKE RYKLSCEKEI  600
CSNVLPCSPN DGSSGCPLIA NRSSSPVENA NLSHQDVKPI RSDISLMGKE FNGTLGKHIG  660
TSCSCSSENT IHPYGDTETP EKKIPSDCPG SELSKQSGRG DVNVPDVEGS EETISWNTGC  720
AFARPRIFCL QHALEIEELL ASKGGVHALI ICHADYVKLK ALAISIAEEI EFQFDYKDVA  780
LANASKSNLH LINISIDDEG YEEEGTDWTS RMGLNLKHSS KIRKETSESQ EQPPLSFWGL  840
FSKPSPISVV SNLKWLCRKA RTPYKVIGYA SSPDVVATPD KVKPAVTKTQ IDTSGNAHEN  900
IGSEQTLQQD CVLQESNDVA DMCKRPKVND QDGHSLINIP IAVAEYPMMH QVCERPVSVS  960
ACDDPICSFD SQDSPTTVAV SAGKPTREQC GAESTELSTV KQFLDNGLIA EGGSMNFISN  1020
HEHLESDNAT SVCKDEQLQV QQDQLAMVLC NNPNTELVAG ELHGGAASST LENEDSCGNT  1080
SYCSDTVLKN SKPDTDDQPE TCDRSVVLVT PKSSCDQMIS SSDRSCSLTL DCPVSTDAAF  1140
SSEKLSMAHD LMGSELQAVH NSKAEVAASL TDVKGAKLNS IHTAQLPHES PSSDFIISEG  1200
AQSASTTAIP RKNGTSMHTE SNSIDILLGV LADESKVSSG KDEVGKASLT LMTLAGNDQS  1260
ADDVTQDEVA EITDPSHGFC ASDIVSRSIG SSNRTNIICY ARRKHKRKSG SEFNINSPQS  1320
LGSFVRSPCE SLRPRTRPAI VEDMTNETKT AEASTANKRK KAKVEAFQCD IEFCDMTFET  1380
KAELRAHQRN ICTDESCGKR FSSHKYLKRH QCVHRDERPF KCPWDGCPMT FKWLWAQTEH  1440
IRVHTGERPY KCSAPDCGQS FRYVSDYSRH RKKFNHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	214	QRKKKQKR
2	208	215	RKKKQKRE
3	1302	1308	RRKHKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	1e-179	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G03740.2