PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G03740.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 1432aa MW: 156787 Da PI: 6.1286

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G03740.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	1322	1347	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C C+++F +k +L+ H+r+ + ONIVA03G03740.1 1322 FQCDieFCDMTFETKAELRAHQRNiC 1347 899999*****************877 PP
2	zf-C2H2	12.6	0.00041	1347	1369	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+Fs++ +LkrH+ +H ONIVA03G03740.1 1347 CTdeSCGKRFSSHKYLKRHQCVH 1369 77778***************998 PP
3	zf-C2H2	13.7	0.00018	1405	1431	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ dCg+sF+ s++ rH ++ H ONIVA03G03740.1 1405 YKCSapDCGQSFRYVSDYSRHRKKfnH 1431 99********************98666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1432 aa Download sequence
MPPQPPPAAS ASASAPDPAV PAWLRGLPRA PEYRPTESEF ADPIAFLSRV EREAAAYGIC 60 KVIPPHPRPS RRFVFAHLNR SLVSSCDAPA PSPAAASDSS IPPSSSSPPP ASAAVFTTRH 120 QELGNPRRGR PTPQVLKQVW QSGERYTLDQ FESKSRAFSK THLAGLHEPT ALAVESLFWK 180 ASADRPIYIE YANDVPGSGF AAPVQLQRKK KQKRETAPMD EWEKSSGWRL SNSPWNLQAI 240 ARAPGSLTRF MPDDVPGVTS PMVYIGMLFS WFAWHVEDHD LHSLNFLHTG APKTWYAVPG 300 DRAVELEEVI RVHGYGGNTD RIASLAVLGE KTTLMSPEVL IDNGVPCCRL VQYPGEFVVT 360 FPRAYHVGFS HGFNCGEAAN FATPQWLKFA KEAAVRRAVM NYLPMLSHQQ LLNPRELLSG 420 IRTSRLRDRK KEDRELLVKQ EFLQDMISEN ELICSFLGKK SVDNVVLWEP DLLPSLTALH 480 PCSSCSKAPE KKGEDGPRIG STQSSSKDDS SSDGTACMTG TQSKGLSMDS KQAPEGEKLD 540 TDDGDDLPFD LSIDSGSLTC VACGILGYPF MAILQPSRKA LEEISLVDKE RYKLSCEKEI 600 CSNVLPCSPN DGSSGCPLIA NRSSSPVENA NLSHQDVKPI RSDISLMGKE FNGTLGKHIG 660 TSCSCSSENT IHPYGDTETP EKKIPSDCPG SELSKQSGRG DVNVPDVEGS EETISWNTGC 720 AFARPRIFCL QHALEIEELL ASKGGVHALI ICHADYVKLK ALAISIAEEI EFQFDYKDVA 780 LANASKSNLH LINISIDDEG YEEEGTDWTS RMGLNLKHSS KIRKETSESQ EQPPLSFWGL 840 FSKPSPISVV SNLKWLCRKA RTPYKVIGYA SSPDVVATPD KVKPAVTKTQ IDTSGNAHEN 900 IGSEQTLQQD CVLQESNDVA DMCKRPKDSP TTVAVSAGKP TREQCGAEST ELSTVKQFLD 960 NGLIAEGGSM NFISNHEHLE SDNATSVCKD EQLQVQQDQL AMVLCNNPNT ELVAGELHGG 1020 AASSTLENED SCGNTSYCSD TVLKNSKPDT DDQPETCDRS VVLVTPKSSC DQMISSSDRS 1080 CSLTLDCPVS TDAAFSSEKL SMAHDLMGSE LQAVHNSKAE VAASLTDVKG AKLNSIHTAQ 1140 LPHESPSSDF IISEGAQSAS TTAIPRKNGT SMHTESNSID ILLGVLADES KVSSGKDEVG 1200 KASLTLMTLA GNDQSADDVT QDEVAEITDP SHGFCASDIV SRSIGSSNRT NIICYARRKH 1260 KRKSGSEFNI NSPQSLGSFV RSPCESLRPR TRPAIVEDMT NETKTAEAST ANKRKKAKVE 1320 AFQCDIEFCD MTFETKAELR AHQRNICTDE SCGKRFSSHK YLKRHQCVHR DERPFKCPWD 1380 GCPMTFKWLW AQTEHIRVHT GERPYKCSAP DCGQSFRYVS DYSRHRKKFN HY

Sequence ? help Back to Top

Protein Sequence Length: 1432 aa Download sequence

MPPQPPPAAS ASASAPDPAV PAWLRGLPRA PEYRPTESEF ADPIAFLSRV EREAAAYGIC  60
KVIPPHPRPS RRFVFAHLNR SLVSSCDAPA PSPAAASDSS IPPSSSSPPP ASAAVFTTRH  120
QELGNPRRGR PTPQVLKQVW QSGERYTLDQ FESKSRAFSK THLAGLHEPT ALAVESLFWK  180
ASADRPIYIE YANDVPGSGF AAPVQLQRKK KQKRETAPMD EWEKSSGWRL SNSPWNLQAI  240
ARAPGSLTRF MPDDVPGVTS PMVYIGMLFS WFAWHVEDHD LHSLNFLHTG APKTWYAVPG  300
DRAVELEEVI RVHGYGGNTD RIASLAVLGE KTTLMSPEVL IDNGVPCCRL VQYPGEFVVT  360
FPRAYHVGFS HGFNCGEAAN FATPQWLKFA KEAAVRRAVM NYLPMLSHQQ LLNPRELLSG  420
IRTSRLRDRK KEDRELLVKQ EFLQDMISEN ELICSFLGKK SVDNVVLWEP DLLPSLTALH  480
PCSSCSKAPE KKGEDGPRIG STQSSSKDDS SSDGTACMTG TQSKGLSMDS KQAPEGEKLD  540
TDDGDDLPFD LSIDSGSLTC VACGILGYPF MAILQPSRKA LEEISLVDKE RYKLSCEKEI  600
CSNVLPCSPN DGSSGCPLIA NRSSSPVENA NLSHQDVKPI RSDISLMGKE FNGTLGKHIG  660
TSCSCSSENT IHPYGDTETP EKKIPSDCPG SELSKQSGRG DVNVPDVEGS EETISWNTGC  720
AFARPRIFCL QHALEIEELL ASKGGVHALI ICHADYVKLK ALAISIAEEI EFQFDYKDVA  780
LANASKSNLH LINISIDDEG YEEEGTDWTS RMGLNLKHSS KIRKETSESQ EQPPLSFWGL  840
FSKPSPISVV SNLKWLCRKA RTPYKVIGYA SSPDVVATPD KVKPAVTKTQ IDTSGNAHEN  900
IGSEQTLQQD CVLQESNDVA DMCKRPKDSP TTVAVSAGKP TREQCGAEST ELSTVKQFLD  960
NGLIAEGGSM NFISNHEHLE SDNATSVCKD EQLQVQQDQL AMVLCNNPNT ELVAGELHGG  1020
AASSTLENED SCGNTSYCSD TVLKNSKPDT DDQPETCDRS VVLVTPKSSC DQMISSSDRS  1080
CSLTLDCPVS TDAAFSSEKL SMAHDLMGSE LQAVHNSKAE VAASLTDVKG AKLNSIHTAQ  1140
LPHESPSSDF IISEGAQSAS TTAIPRKNGT SMHTESNSID ILLGVLADES KVSSGKDEVG  1200
KASLTLMTLA GNDQSADDVT QDEVAEITDP SHGFCASDIV SRSIGSSNRT NIICYARRKH  1260
KRKSGSEFNI NSPQSLGSFV RSPCESLRPR TRPAIVEDMT NETKTAEAST ANKRKKAKVE  1320
AFQCDIEFCD MTFETKAELR AHQRNICTDE SCGKRFSSHK YLKRHQCVHR DERPFKCPWD  1380
GCPMTFKWLW AQTEHIRVHT GERPYKCSAP DCGQSFRYVS DYSRHRKKFN HY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	214	QRKKKQKR
2	208	215	RKKKQKRE
3	1257	1263	RRKHKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	1e-180	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G03740.1