PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G02550.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 303aa    MW: 32520.9 Da    PI: 7.6702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G02550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.64e-10121162550
              AP2   5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaar 50 
                      GV+++   grW++  rd       + r +lg+f ++eeA++a++a+ 
  ONIVA03G02550.1 121 GVYQRQ-PGRWAVDFRD----SqLKVRQWLGTFPSEEEARAAYDAFE 162
                      9**998.9******888....23459*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MVAFRRIRIY YSDPDATDSD SDSDSDSDSA DAGDHDISSR SSRTNAAARR KVIVISLSRK  60
KGRSSSQSGR HYRRRRSEIP AAAAKAVEAE DWPSSSDGMR RGAVAAARSA SAAAKKGSRG  120
GVYQRQPGRW AVDFRDSQLK VRQWLGTFPS EEEARAAYDA FEVQVRASLS CGGAGAVAPS  180
PARVKIQLPA PRRVFGRRKK TQTTTTTTES SSQATVSASP SSEAAALPSS SASAAMPPLL  240
NPPPFVVDPF LGEDDHLAAD DDRFGFGLAD LGHLPLPFLD DNDMDFKLSD SDDLSSLFDI  300
GFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15976RKKGRSSSQSGRHYRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-07ERF family protein