PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G02430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bHLH | ||||||||
Protein Properties | Length: 403aa MW: 43183.6 Da PI: 4.665 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.8 | 7.1e-12 | 182 | 224 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L ONIVA03G02430.1 182 MAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVKEL 224 79*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence |
MELDEESFLD ELMSLRRDGS APWQAPPYPG GGGGGGMMMS DLLFYGGDGG SAEARGGMDG 60 SPFQELASMA APPPQHPHEE FNFDCLSEVC NPYRSCGAQL VPSEAASQTQ TQLTPLRDAM 120 VAEEETSGDK ALLHGGGGSS SPTFMFGGGA GESSEMMAGI RGVGGGVHPR SKLHGTPSKN 180 LMAERRRRKR LNDRLSMLRS IVPKISKMDR TSILGDTIDY VKELTERIKT LEEEIGATPE 240 ELDLLNTMKD SSSGNNNEML VRNSTKFDVE NRGSGNTRIE ICCPANPGVL LSTVSALEVL 300 GLEIEQCVVS CFSDFGMQAS CLQEDGKRQV VSTDEIKQTL FRSAGYGGSS GSTSFLNTPE 360 SKLKICSSIV SFAFVNRYGN RPCDLSNIGF ELNAKVPIVC TLA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 184 | 191 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 4e-58 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G02430.1 |