PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G01980.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 399aa MW: 41962.8 Da PI: 8.1819

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G01980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.9e-32	21	74	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+++LGG++kAtPk++l+lm+v gLt++hvkSHLQ+YR ONIVA03G01980.1 21 PRLRWTPDLHHCFVHAIHKLGGQDKATPKRVLQLMGVGGLTISHVKSHLQMYRN 74 8****************************************************5 PP
2	Myb_DNA-binding	51.5	2.4e-16	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg t+k++ + mg g+t ++ks++q+y+ ONIVA03G01980.1 22 RLRWTPDLHHCFVHAIHKLGGQdkaTPKRVLQLMGvGGLTISHVKSHLQMYR 73 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MVGGGRERNG GVRQYNRSKV PRLRWTPDLH HCFVHAIHKL GGQDKATPKR VLQLMGVGGL 60 TISHVKSHLQ MYRNMRNDLG MQGIQVQQVD QEHTYGGGVE VWTDMQQCDH DECDVPCCSC 120 HSPKPRKEPL LHLQLKSSGM NIDEPGTRAR IAAPNVRSCR DDAAASATET RRRRGGRPEE 180 VDDDANASAS PRISQLQLLR LRGHGIRESD MSPSTSLQCY YVRSQRTTTM PPGAAAAAAG 240 GDGGSQCYAA PRYSSSSKLK FLGFVVTSGP PPPRLPPPAA CCCGSDDNIP FQVGTFAPHR 300 VAPPTASCGG GGGGRAEARP SSSYRSVWFE PAAAAAASNN GVAPDGEHDD GCSLSLSLAL 360 DTGCGGAGAG AGGSLVSSTT SSSSGSRISL DLSLSTLDS

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MVGGGRERNG GVRQYNRSKV PRLRWTPDLH HCFVHAIHKL GGQDKATPKR VLQLMGVGGL  60
TISHVKSHLQ MYRNMRNDLG MQGIQVQQVD QEHTYGGGVE VWTDMQQCDH DECDVPCCSC  120
HSPKPRKEPL LHLQLKSSGM NIDEPGTRAR IAAPNVRSCR DDAAASATET RRRRGGRPEE  180
VDDDANASAS PRISQLQLLR LRGHGIRESD MSPSTSLQCY YVRSQRTTTM PPGAAAAAAG  240
GDGGSQCYAA PRYSSSSKLK FLGFVVTSGP PPPRLPPPAA CCCGSDDNIP FQVGTFAPHR  300
VAPPTASCGG GGGGRAEARP SSSYRSVWFE PAAAAAASNN GVAPDGEHDD GCSLSLSLAL  360
DTGCGGAGAG AGGSLVSSTT SSSSGSRISL DLSLSTLDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	4e-26	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G01980.1