PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G01480.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 314aa MW: 34606.1 Da PI: 6.1902

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G01480.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	264	297	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + ONIVA03G01480.2 264 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 297 469*****************************87 PP
2	ELK	25.4	3.3e-09	218	239	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ ONIVA03G01480.2 218 ELKIELKQGFKSRIEDVREEIL 239 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MQGGNHGGME MGVGSFTGGG GGGECSSSSA TAAAAAAAAA AAAAAEAEER QLLKGEIAVH 60 PLCEQLVAAH VGCLRVATPI DHLPLIDAQL AQSSGLLHSY AAHHRPFLSP HDKQELDSFL 120 AQYMMLLCSF REQLQQHVRV HAVEAVMACR EIEQSLQDLT GATLEEGTGA TMSEDEDETA 180 PMLEGPMDMG SDGHDLMGFG PLMPTDSERS LMERVRQELK IELKQGFKSR IEDVREEILR 240 KRRAGKLPGD TTTILKQWWQ QHSKWPYPTE DDKAKLVEET GLQLKQINNW FINQRKRNWH 300 NNSQTSTLKS KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	314	RKRNWHNNSQTSTLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-138	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G01480.2