PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G01420.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MIKC_MADS
Protein Properties Length: 359aa    MW: 40236.1 Da    PI: 10.4096
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G01420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.97.5e-3095145151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
           SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                      krien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s
  ONIVA03G01420.2  95 KRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 145
                      79***********************************************86 PP

2K-box69.79.5e-24207300699
            K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                      g+++ +++ e+ + +++ L k++e L++ +R+llGe+L+++s++eL++Le +Le+sl +iR +K++ll eq+ +l++ke +l+++n++Lr+k +
  ONIVA03G01420.2 207 GNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCK 300
                      4557788899*********************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MTIKNGNATA RTPPVAVCLC LPLPRGGVAT TRTKGNGNTR RDQKGKPRRR GRGEKGEGVG  60
EKEERASSLG YGQTLQRLHH HSLPFLMVRG KTQMKRIENP TSRQVTFSKR RNGLLKKAFE  120
LSVLCDAEVA LIVFSPRGKL YEFASASCRL NSHTTSIKKL VVRLARYVTP KSIYIIKGST  180
SEDVTSALTP LKKTIERYRT YTKENIGNKT VQQDIEQVKA DADGLAKKLE ALETYKRKLL  240
GEKLDECSIE ELHSLEVKLE RSLISIRGRK TKLLEEQVAK LREKEMKLRK DNEELREKCK  300
NQPPLSAPLT VRAEDENPDR NINTTNDNMD VETELFIGLP GRSRSSGGAA EDSQAMPHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.11e-62MIKC_MADS family protein