PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G01420.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 359aa MW: 40236.1 Da PI: 10.4096 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.9 | 7.5e-30 | 95 | 145 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s ONIVA03G01420.2 95 KRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 145 79***********************************************86 PP | |||||||
2 | K-box | 69.7 | 9.5e-24 | 207 | 300 | 6 | 99 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 g+++ +++ e+ + +++ L k++e L++ +R+llGe+L+++s++eL++Le +Le+sl +iR +K++ll eq+ +l++ke +l+++n++Lr+k + ONIVA03G01420.2 207 GNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELREKCK 300 4557788899*********************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MTIKNGNATA RTPPVAVCLC LPLPRGGVAT TRTKGNGNTR RDQKGKPRRR GRGEKGEGVG 60 EKEERASSLG YGQTLQRLHH HSLPFLMVRG KTQMKRIENP TSRQVTFSKR RNGLLKKAFE 120 LSVLCDAEVA LIVFSPRGKL YEFASASCRL NSHTTSIKKL VVRLARYVTP KSIYIIKGST 180 SEDVTSALTP LKKTIERYRT YTKENIGNKT VQQDIEQVKA DADGLAKKLE ALETYKRKLL 240 GEKLDECSIE ELHSLEVKLE RSLISIRGRK TKLLEEQVAK LREKEMKLRK DNEELREKCK 300 NQPPLSAPLT VRAEDENPDR NINTTNDNMD VETELFIGLP GRSRSSGGAA EDSQAMPHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-62 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G01420.2 |