PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G01340.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 1360aa MW: 153943 Da PI: 7.2212

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G01340.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71.8	9.5e-23	1098	1159	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++W KYGqK++ g+ +prsY+rC ++ gC ++k+v+ +++d ++++++Y geH+++ ONIVA03G01340.2 1098 VDDGFSWVKYGQKDILGTMYPRSYFRCIHRqtkGCLATKQVQPTDDDHQILDVIYYGEHTCD 1159 59************************998889************************97 PP
2	WRKY	78.8	6.2e-25	1219	1280	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG K++ g+++prsY+rCt++ gC ++k+++r + dp +++++Y+g+H+++ ONIVA03G01340.2 1219 LDDGYSWRKYGLKDILGAKYPRSYFRCTHRntqGCVATKQIQRRDGDPLLFDVVYHGDHTCS 1280 59*************************98889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1360 aa Download sequence
MEGTVFNLPG RLEELLCHHG SMLPKGADEE IPLIKQDLEE IISILHGHSE PKLEDHGMVV 60 RCWMKEVREL SYDIEDSIDQ YKHAARSQNR PNIRHRKFNR WRGNKIPCIP QKLKQRLWMA 120 NKIREFSLRA QEALQRHAMY NNLGGVASTA STTRGDVCSA TPLHPTQTQF REHVDNVRSV 180 SIEADGMEAA LNDLNKLKNL LAGIPTASLV QFREHADKVR GIHTDIEAIL NKLENIPPGI 240 TITTTTRGDV SSTSSRQPTR FMESTCHVGI DAAMDQLENL IDVCGEEKLK VVSIVGVGGV 300 GKTTLANKLY HKLRWQFECW AFVRSSQKTD MRRLLINILS QVRPHQSPDN WKVHSLISSI 360 RTYLQDKRFL IVIDDLWATS TWDIIKCALP EGNKSSRILT TTEIEDLALQ SCSYDLKFIF 420 KMIPFGEDDS RKLLFSIVFG SHSKCPPEVS ETLYDIVRKC GGLPLAIVTV ASLLASQLDK 480 LEQWDYINKS LGYSLMANPT LEGMKQLLNL CYSNLPQHLK ACMLYLSMYQ GDHIIWKDDL 540 VNQWIAEGFI CATEEHDKEE ISRGYFDELV GRKIIQPVHI DDSGEVLSCV VHHIVLNFVT 600 YKSIEENFII AIDHSQATIR FADKVRRLSI HFSNVEDAPP PTNMRLFQVR TIAFFGVLKY 660 MPFIMEFRLI KVLFLHFLGD EDSTGIVDLT KISELVRLRY LKVTSNATVK LPTRLQGLQY 720 LETLKIDGKI SEVPSDIIHL PGLLHLTLPA KTNLPTGISH VTSLRTIGYF DLSCNSVENL 780 WRLGELTNLW DLQLTYSEIH SDNLKNNMKY LGPILGKLRN LKSITLSADG SSCPDTLRID 840 RDTKTRIYVD GWSSVSSPPA LLQRFELLPC VCIFSNLPNW IGQLGNLCIL KIGIREVTSN 900 NIDVLGVLPE LIVLSLYVHT KPAERIVFDN AGFSILRYFK FICSVAWMKF EVGAMPSLRK 960 LKLGFDVHRA DQHDIIPVGI EHLSGLEEIS AKIRVACSAH DHCKRFAESA LSNAFMMHPG 1020 RPSVNIRCVD WTFDGKDDDN VRTQEEEHRT LQKQHHTAKE GSNEKSPVKQ RDPREGAHKS 1080 VDGRETLRRI RVKVSSTVDD GFSWVKYGQK DILGTMYPRS YFRCIHRQTK GCLATKQVQP 1140 TDDDHQILDV IYYGEHTCDQ SARSDDRQPK SSRPAASSNL QEPQQPGLEQ SRPAAKRRRK 1200 TVRWKTQVRV SSVQDVGPLD DGYSWRKYGL KDILGAKYPR SYFRCTHRNT QGCVATKQIQ 1260 RRDGDPLLFD VVYHGDHTCS ERASLNEQVT WPRSSASSTE QSSTITYTAA AGSVEDDEEG 1320 VTSATNFLSM DDMLDLGGGD VIDMDFPSFD FDAIDALLLG

Sequence ? help Back to Top

Protein Sequence Length: 1360 aa Download sequence

MEGTVFNLPG RLEELLCHHG SMLPKGADEE IPLIKQDLEE IISILHGHSE PKLEDHGMVV  60
RCWMKEVREL SYDIEDSIDQ YKHAARSQNR PNIRHRKFNR WRGNKIPCIP QKLKQRLWMA  120
NKIREFSLRA QEALQRHAMY NNLGGVASTA STTRGDVCSA TPLHPTQTQF REHVDNVRSV  180
SIEADGMEAA LNDLNKLKNL LAGIPTASLV QFREHADKVR GIHTDIEAIL NKLENIPPGI  240
TITTTTRGDV SSTSSRQPTR FMESTCHVGI DAAMDQLENL IDVCGEEKLK VVSIVGVGGV  300
GKTTLANKLY HKLRWQFECW AFVRSSQKTD MRRLLINILS QVRPHQSPDN WKVHSLISSI  360
RTYLQDKRFL IVIDDLWATS TWDIIKCALP EGNKSSRILT TTEIEDLALQ SCSYDLKFIF  420
KMIPFGEDDS RKLLFSIVFG SHSKCPPEVS ETLYDIVRKC GGLPLAIVTV ASLLASQLDK  480
LEQWDYINKS LGYSLMANPT LEGMKQLLNL CYSNLPQHLK ACMLYLSMYQ GDHIIWKDDL  540
VNQWIAEGFI CATEEHDKEE ISRGYFDELV GRKIIQPVHI DDSGEVLSCV VHHIVLNFVT  600
YKSIEENFII AIDHSQATIR FADKVRRLSI HFSNVEDAPP PTNMRLFQVR TIAFFGVLKY  660
MPFIMEFRLI KVLFLHFLGD EDSTGIVDLT KISELVRLRY LKVTSNATVK LPTRLQGLQY  720
LETLKIDGKI SEVPSDIIHL PGLLHLTLPA KTNLPTGISH VTSLRTIGYF DLSCNSVENL  780
WRLGELTNLW DLQLTYSEIH SDNLKNNMKY LGPILGKLRN LKSITLSADG SSCPDTLRID  840
RDTKTRIYVD GWSSVSSPPA LLQRFELLPC VCIFSNLPNW IGQLGNLCIL KIGIREVTSN  900
NIDVLGVLPE LIVLSLYVHT KPAERIVFDN AGFSILRYFK FICSVAWMKF EVGAMPSLRK  960
LKLGFDVHRA DQHDIIPVGI EHLSGLEEIS AKIRVACSAH DHCKRFAESA LSNAFMMHPG  1020
RPSVNIRCVD WTFDGKDDDN VRTQEEEHRT LQKQHHTAKE GSNEKSPVKQ RDPREGAHKS  1080
VDGRETLRRI RVKVSSTVDD GFSWVKYGQK DILGTMYPRS YFRCIHRQTK GCLATKQVQP  1140
TDDDHQILDV IYYGEHTCDQ SARSDDRQPK SSRPAASSNL QEPQQPGLEQ SRPAAKRRRK  1200
TVRWKTQVRV SSVQDVGPLD DGYSWRKYGL KDILGAKYPR SYFRCTHRNT QGCVATKQIQ  1260
RRDGDPLLFD VVYHGDHTCS ERASLNEQVT WPRSSASSTE QSSTITYTAA AGSVEDDEEG  1320
VTSATNFLSM DDMLDLGGGD VIDMDFPSFD FDAIDALLLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	1e-32	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G01340.2